ModCRE DB

Transcription factor

B7Z2Y7

Zinc finger protein 768

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 453 aa

83 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)78
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 59.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 57.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.9% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 56.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 55.9% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 55.9% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 55.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 54.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 54.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.4% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.2% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 53.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 53.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 53.6% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 52.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.6% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 52.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 52.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.0% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 51.9% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.9% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.8% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 51.7% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 51.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.5% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 51.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.3% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.3% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.3% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 51.1% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 51.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.1% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 50.9% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 50.7% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.6% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.6% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 50.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.2% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.2% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 50.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.2% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.0% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 50.0% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_B7Z2Y7_B7Z2Y7_HUMAN:396:445_1llm_D_1 ModCRE Homology model AAGCGCGCGGGT Region 396-445 · 1 3D model Open · Scan
TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3j_E_1 ModCRE Homology model CCCCCGGGGGCACTGTCCCCCCGGCC Region 232-448 · 1 3D model Open · Scan
TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3m_C_1 ModCRE Homology model TGAACCCCCCGGGGGCCCCCCCCCGA Region 232-448 · 1 3D model Open · Scan
TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5wjq_D_1 ModCRE Homology model TTACCCAGACCCTCCCCCGTCCCCCAA Region 232-448 · 1 3D model Open · Scan
TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:239:392_2i13_A_1 ModCRE Homology model ACCCATAGACTAGAGGTAAGT Region 239-392 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 453 aa
228-448

Region 228-448 5 PWM

Residues
221 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 228-4486 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B7Z2Y7_B7Z2Y7_HUMAN:396:445_1llm_D_1 1llm 396-445 View model · PDB
Predicted = Low TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:228:448_7w1m_H_1 7w1m 228-448 View model · PDB
Predicted = Low TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3j_E_1 5v3j 232-448 View model · PDB
Predicted = Low TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3m_C_1 5v3m 232-448 View model · PDB
Predicted = Low TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5wjq_D_1 5wjq 232-448 View model · PDB
Predicted = Low TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:239:392_2i13_A_1 2i13 239-392 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 226:449 239 392 P:A · DNA:C,D 55.8% / 69.5% 100 View · PDB TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:239:392_2i13_A_1
1 5v3m 226:449 232 448 P:C · DNA:A,B 48.4% / 62.7% 78 View · PDB TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3m_C_1
2 5v3j 226:449 232 448 P:E · DNA:A,B 48.4% / 62.7% 78 View · PDB TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5v3j_E_1
3 5wjq 226:449 232 448 P:D · DNA:A,B 47.9% / 62.2% 77 View · PDB TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:232:448_5wjq_D_1
1 1llm 226:449 396,396 445,445 P:C,D · DNA:A,B 42.0% / 68.0% 57,58 View · PDB DIMER_tr_B7Z2Y7_B7Z2Y7_HUMAN:396:445_1llm_D_1
5 7w1m 226:449 228 448 P:H · DNA:F,G 37.2% / 52.7% 68 View · PDB TFS_tr_B7Z2Y7_B7Z2Y7_HUMAN:228:448_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
29-41PF05001RNA polymerase Rpb1 C-terminal repeatNo overlap with loaded model regions
43-55PF05001RNA polymerase Rpb1 C-terminal repeatNo overlap with loaded model regions
86-97PF05001RNA polymerase Rpb1 C-terminal repeatNo overlap with loaded model regions
99-111PF05001RNA polymerase Rpb1 C-terminal repeatNo overlap with loaded model regions
232-252PF00096Zinc finger, C2H2 typeoverlaps 228-448
258-280PF00096Zinc finger, C2H2 typeoverlaps 228-448
286-308PF00096Zinc finger, C2H2 typeoverlaps 228-448
314-336PF00096Zinc finger, C2H2 typeoverlaps 228-448
342-364PF00096Zinc finger, C2H2 typeoverlaps 228-448
370-392PF00096Zinc finger, C2H2 typeoverlaps 228-448
398-420PF00096Zinc finger, C2H2 typeoverlaps 228-448
426-448PF00096Zinc finger, C2H2 typeoverlaps 228-448