ModCRE DB

Transcription factor

B7Z5F4

cDNA FLJ55351, highly similar to ETS translocation variant 4

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 430 aa

41 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0764.1 NN 70+% JASPAR ACCGGAAGTA 88.8% identity Open · Scan
M04793_2.00 NN 70+% CisBP GACCGGAAGTG 87.8% identity Open · Scan
M09073_2.00 NN 70+% CisBP CAGGAAGT 82.9% identity Open · Scan
Nearest Neighbor (70% - 40%)38
MotifPredictionSourceDNA bindingSupportLogoActions
M01489_2.00 NN 70-40% CisBP AACCGGAAGT 63.6% identity Open · Scan
M06192_2.00 NN 70-40% CisBP ACCGGAAAT 63.4% identity Open · Scan
M03001_2.00 NN 70-40% CisBP ACCGGAAGTG 62.5% identity Open · Scan
MA0076.1 NN 70-40% JASPAR ACCGGAAGT 62.5% identity Open · Scan
M09539_2.00 NN 70-40% CisBP ACCGGAAGTG 62.1% identity Open · Scan
MA0149.1 NN 70-40% JASPAR GGAAGGAAGGAAGGAAGG 62.1% identity Open · Scan
MA0475.1 NN 70-40% JASPAR ACAGGAAGTGG 62.1% identity Open · Scan
M06188_2.00 NN 70-40% CisBP ACCGGAAAT 61.0% identity Open · Scan
M04773_2.00 NN 70-40% CisBP AACCGGATATCCGGTT 60.9% identity Open · Scan
M09081_2.00 NN 70-40% CisBP GGACCGGAAGTGGG 60.9% identity Open · Scan
MA0028.1 NN 70-40% JASPAR GAGCCGGAAG 60.9% identity Open · Scan
MA0474.1 NN 70-40% JASPAR ACAGGAAGTGG 60.9% identity Open · Scan
MA0474.2 NN 70-40% JASPAR ACCGGAAGTG 60.9% identity Open · Scan
MA1484.1 NN 70-40% JASPAR GACCGGAAGT 60.6% identity Open · Scan
M01493_2.00 NN 70-40% CisBP AACCGGAAGT 60.2% identity Open · Scan
MA0098.1 NN 70-40% JASPAR CTTCCG 60.2% identity Open · Scan
MA0098.2 NN 70-40% JASPAR CCCACTTCCTGTCTC 60.2% identity Open · Scan
M04733_2.00 NN 70-40% CisBP ACCGGAAGTG 59.0% identity Open · Scan
MA0759.1 NN 70-40% JASPAR ACCGGAAGTA 59.0% identity Open · Scan
M03010_2.00 NN 70-40% CisBP ACCGGAAGTA 57.9% identity Open · Scan
M09046_2.00 NN 70-40% CisBP GGCCGGAAGTG 55.7% identity Open · Scan
M00157_2.00 NN 70-40% CisBP AACCGGAAGT 55.0% identity Open · Scan
MA0062.2 NN 70-40% JASPAR CCGGAAGTGGC 55.0% identity Open · Scan
MA0156.1 NN 70-40% JASPAR CAGGAAAT 54.7% identity Open · Scan
MA0686.1 NN 70-40% JASPAR ACCCGGATGTA 54.7% identity Open · Scan
M01488_2.00 NN 70-40% CisBP AAACCGGATA 53.5% identity Open · Scan
M04744_2.00 NN 70-40% CisBP AACCCGGAAGTA 52.6% identity Open · Scan
MA0761.1 NN 70-40% JASPAR ACCGGAAGTA 52.3% identity Open · Scan
M03726_2.00 NN 70-40% CisBP GACCGGAAGTG 51.7% identity Open · Scan
MA0762.1 NN 70-40% JASPAR AACCGGAAATA 51.5% identity Open · Scan
MA0760.1 NN 70-40% JASPAR ACCGGAAGTG 51.1% identity Open · Scan
M09048_2.00 NN 70-40% CisBP GGAAACAGGAAGTGGG 50.9% identity Open · Scan
M06186_2.00 NN 70-40% CisBP AACAGGAAGT 50.5% identity Open · Scan
MA0473.1 NN 70-40% JASPAR GAACCAGGAAGTG 50.5% identity Open · Scan
M01494_2.00 NN 70-40% CisBP AACCGGAAGT 50.0% identity Open · Scan
M04729_2.00 NN 70-40% CisBP AATCCGGAAGTA 50.0% identity Open · Scan
M06185_2.00 NN 70-40% CisBP ACCGGAAGT 50.0% identity Open · Scan
MA1483.1 NN 70-40% JASPAR AACCCGGAAGTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 430 aa
281-373

Region 281-373 0 PWM

Residues
93 aa
Domains
PF04621 · PEA3 subfamily ETS-domain transcription factor N terminal domain PF00178 · Ets-domain
3D models
1 active PDB
Templates
2NNY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 281-3731 model
Actions
Predicted = Low DIMER_B7Z5F4:281:373_2nny_B_1 2nny 281-373 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
130-285PF04621PEA3 subfamily ETS-domain transcription factor N terminal domainoverlaps 281-373
287-367PF00178Ets-domainoverlaps 281-373