ModCRE DB

Transcription factor

B7Z5S2

cDNA FLJ61641, moderately similar to Zinc finger protein 267

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 475 aa

123 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)117
MotifPredictionSourceDNA bindingSupportLogoActions
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 68.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 68.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 65.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 63.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 60.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 60.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 59.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.6% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 58.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 58.4% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 58.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 58.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 58.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 57.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 57.8% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 57.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.5% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.1% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 57.1% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 57.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 56.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 56.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.6% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.6% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 55.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.3% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.2% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 55.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 54.6% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.5% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 54.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 54.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 54.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.3% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 54.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.3% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.1% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.9% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 52.9% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.6% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 52.5% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.2% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 52.2% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 52.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.9% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.9% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.7% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 51.4% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.4% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 51.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 51.2% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 51.2% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.1% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.8% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.7% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 50.6% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.6% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.0% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_B7Z5S2_B7Z5S2_HUMAN:417:469_1llm_C_1 ModCRE Homology model CCCCCCGGCGGG Region 417-469 · 1 3D model Open · Scan
TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3j_E_1 ModCRE Homology model CCCCCAGGGGGGAGGGAGCTGTGGAA Region 167-443 · 1 3D model Open · Scan
TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3m_C_1 ModCRE Homology model ACCGGGGCGGGGGGCCCGCGGGCTGA Region 167-443 · 1 3D model Open · Scan
TFS_tr_B7Z5S2_B7Z5S2_HUMAN:168:466_7w1m_H_1 ModCRE Homology model TCGGGGCGCATTTGTGTACCGTCGCCGCCTGGCGGGGGGTGTT Region 168-466 · 1 3D model Open · Scan
TFS_tr_B7Z5S2_B7Z5S2_HUMAN:193:471_5wjq_D_1 ModCRE Homology model GGGCGGGGGGGAGGGGGCCGCGGGTCAC Region 193-471 · 1 3D model Open · Scan
TFS_tr_B7Z5S2_B7Z5S2_HUMAN:233:386_2i13_A_1 ModCRE Homology model TTGTAGGACTAGAAGCTGAAG Region 233-386 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 475 aa
167-471

Region 167-471 6 PWM

Residues
305 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 167-4716 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B7Z5S2_B7Z5S2_HUMAN:417:469_1llm_C_1 1llm 417-469 View model · PDB
Predicted = Low TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3j_E_1 5v3j 167-443 View model · PDB
Predicted = Low TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3m_C_1 5v3m 167-443 View model · PDB
Predicted = Low TFS_tr_B7Z5S2_B7Z5S2_HUMAN:168:466_7w1m_H_1 7w1m 168-466 View model · PDB
Predicted = Low TFS_tr_B7Z5S2_B7Z5S2_HUMAN:193:471_5wjq_D_1 5wjq 193-471 View model · PDB
Predicted = Low TFS_tr_B7Z5S2_B7Z5S2_HUMAN:233:386_2i13_A_1 2i13 233-386 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 162:471 233 386 P:A · DNA:C,D 59.7% / 68.8% 100 View · PDB TFS_tr_B7Z5S2_B7Z5S2_HUMAN:233:386_2i13_A_1
1 5wjq 162:471 193 471 P:D · DNA:A,B 56.6% / 72.4% 99 View · PDB TFS_tr_B7Z5S2_B7Z5S2_HUMAN:193:471_5wjq_D_1
2 5v3m 162:471 167 443 P:C · DNA:A,B 55.6% / 71.5% 100 View · PDB TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3m_C_1
3 5v3j 162:471 167 443 P:E · DNA:A,B 55.6% / 71.5% 100 View · PDB TFS_tr_B7Z5S2_B7Z5S2_HUMAN:167:443_5v3j_E_1
1 1llm 162:471 417,417 469,469 P:C,D · DNA:A,B 45.3% / 60.4% 60,62 View · PDB DIMER_tr_B7Z5S2_B7Z5S2_HUMAN:417:469_1llm_C_1
5 7w1m 162:471 168 466 P:H · DNA:F,G 33.8% / 49.4% 92 View · PDB TFS_tr_B7Z5S2_B7Z5S2_HUMAN:168:466_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
168-190PF00096Zinc finger, C2H2 typeoverlaps 167-471
196-218PF00096Zinc finger, C2H2 typeoverlaps 167-471
224-246PF00096Zinc finger, C2H2 typeoverlaps 167-471
252-274PF00096Zinc finger, C2H2 typeoverlaps 167-471
280-302PF00096Zinc finger, C2H2 typeoverlaps 167-471
308-330PF00096Zinc finger, C2H2 typeoverlaps 167-471
336-358PF00096Zinc finger, C2H2 typeoverlaps 167-471
364-386PF00096Zinc finger, C2H2 typeoverlaps 167-471
392-414PF00096Zinc finger, C2H2 typeoverlaps 167-471
420-442PF00096Zinc finger, C2H2 typeoverlaps 167-471
448-470PF00096Zinc finger, C2H2 typeoverlaps 167-471