ModCRE DB

Transcription factor

B7Z5U7

Nuclear receptor subfamily 4 group A member 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 609 aa

32 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0160.1 NN 70+% JASPAR AAGGTCAC 99.8% identity Open · Scan
Nearest Neighbor (70% - 40%)31
MotifPredictionSourceDNA bindingSupportLogoActions
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 69.1% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.0% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 59.2% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 58.3% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 58.3% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 58.1% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 58.1% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 58.1% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 58.1% identity Open · Scan
M00689_2.00 NN 70-40% CisBP AAAGATCAA 57.1% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 56.9% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 56.9% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 56.9% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 56.9% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 56.4% identity Open · Scan
M02413_2.00 NN 70-40% CisBP CGAGATCAA 56.3% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 55.8% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 55.5% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 55.5% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 55.4% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 55.4% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 54.7% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 54.6% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 54.6% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 54.3% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 53.7% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 53.7% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 53.6% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 53.3% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 52.7% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 51.3% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 609 aa
273-345

Region 273-345 0 PWM

Residues
73 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0N
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 273-3451 model
Actions
Predicted = Low DIMER_B7Z5U7:273:345_1r0n_A_1 1r0n 273-345 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
273-341PF00105Double treble clef zinc finger, C4 typeoverlaps 273-345
409-589PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions