ModCRE DB

Transcription factor

B7Z5X5

cDNA FLJ51062, highly similar to T-brain-1 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 351 aa

32 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0802.1 NN 70+% JASPAR AGGTGTGAAA 88.8% identity Open · Scan
MA0690.1 NN 70+% JASPAR AAGGTGTGAA 70.9% identity Open · Scan
Nearest Neighbor (70% - 40%)30
MotifPredictionSourceDNA bindingSupportLogoActions
M00734_2.00 NN 70-40% CisBP GAGGTGTGAA 62.5% identity Open · Scan
M01030_2.00 NN 70-40% CisBP TTGACACCTC 59.8% identity Open · Scan
M00833_2.00 NN 70-40% CisBP AGGTGTGA 58.8% identity Open · Scan
M02498_2.00 NN 70-40% CisBP AGGTGTCA 58.8% identity Open · Scan
MA0807.1 NN 70-40% JASPAR AGGTGTGA 58.8% identity Open · Scan
MA0801.1 NN 70-40% JASPAR AGGTGTGA 58.3% identity Open · Scan
M06453_2.00 NN 70-40% CisBP AAGTGCGA 58.0% identity Open · Scan
M03559_2.00 NN 70-40% CisBP AGGTGTGAAATTTCACACCT 57.9% identity Open · Scan
M03993_2.00 NN 70-40% CisBP GAGGTGTGAA 57.9% identity Open · Scan
MA0806.1 NN 70-40% JASPAR AGGTGTGA 57.9% identity Open · Scan
M05822_2.00 NN 70-40% CisBP GGAGGTGTGAAT 57.1% identity Open · Scan
MA0805.1 NN 70-40% JASPAR AGGTGTGA 57.1% identity Open · Scan
M08044_2.00 NN 70-40% CisBP GCATTCTGGGAATTGTAGTTT 57.0% identity Open · Scan
MA0688.1 NN 70-40% JASPAR AAGGTGTGAAA 57.0% identity Open · Scan
M02495_2.00 NN 70-40% CisBP TTGACACCTC 56.0% identity Open · Scan
M02496_2.00 NN 70-40% CisBP AAGGTGTCAA 56.0% identity Open · Scan
MA0804.1 NN 70-40% JASPAR TTTCACACCTAGGTGTGAAA 55.6% identity Open · Scan
M05798_2.00 NN 70-40% CisBP AAAGGTGTGAAA 55.3% identity Open · Scan
MA1565.1 NN 70-40% JASPAR GGAGGTGTGAAA 55.3% identity Open · Scan
M01029_2.00 NN 70-40% CisBP AGGTGTGA 55.1% identity Open · Scan
M09427_2.00 NN 70-40% CisBP TTAGCAGGGAGGTGTGAAAT 55.1% identity Open · Scan
MA0009.1 NN 70-40% JASPAR CTAGGTGTGAA 55.1% identity Open · Scan
MA0009.2 NN 70-40% JASPAR TCACACCTAGGTGTGA 55.1% identity Open · Scan
MA1567.1 NN 70-40% JASPAR GAGGTGTGAA 55.1% identity Open · Scan
M03994_2.00 NN 70-40% CisBP AAGGTGTGAA 54.5% identity Open · Scan
M03554_2.00 NN 70-40% CisBP AGGTGTGAAATTCACACCT 53.6% identity Open · Scan
MA0803.1 NN 70-40% JASPAR AGGTGTGA 53.6% identity Open · Scan
M03988_2.00 NN 70-40% CisBP AGGTGTGAA 52.3% identity Open · Scan
M09650_2.00 NN 70-40% CisBP CCTGTCAACACC 52.3% identity Open · Scan
MA0689.1 NN 70-40% JASPAR TAGGTGTGAAG 52.3% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 351 aa
1-105

Region 1-105 0 PWM

Residues
105 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-1051 model
Actions
Predicted = Low DIMER_B7Z5X5:1:105_4s0h_E_1 4s0h 1-105 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-106PF00907T-boxoverlaps 1-105
125-349PF16176T-box transcription factor-associatedNo overlap with loaded model regions