ModCRE DB

Transcription factor

B7Z6D4

Zinc finger protein ZFAT (Zinc finger protein 406)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1130 aa

9 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07842_2.00 NN 70-40% CisBP CTCACCTG 61.7% identity Open · Scan
ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sss_A_1 ModCRE Homology model TCCGGGGGCCCCGGAGGCGCCCC Region 692-877 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sst_A_1 ModCRE Homology model CCTCGGGGGGCCGCCCCCGCGGG Region 692-877 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:764:878_5t0u_A_1 ModCRE Homology model CCGCAAGGCCCGAGTGTT Region 764-878 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:772:846_1a1g_A_1 ModCRE Homology model CCCGCGGACT Region 772-846 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:795:907_6e93_A_1 ModCRE Homology model ATCGTGCCACCCGGGTTG Region 795-907 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:795:907_6e94_A_1 ModCRE Homology model ATCGAACGACTCCGGATG Region 795-907 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:796:875_2kmk_A_1 ModCRE Homology model TTACCGTGGGCCGCCC Region 796-875 · 1 3D model Open · Scan
TFS_tr_B7Z6D4_B7Z6D4_HUMAN:822:904_6ki6_A_1 ModCRE Homology model GGTTACGGTAA Region 822-904 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1130 aa
630-908

Region 630-908 8 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1A1G, 1LLM, 2KMK, 5T0U, 6E93, 6E94, 6KI6, 7W1M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 630-90811 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B7Z6D4_B7Z6D4_HUMAN:793:843_1llm_C_1 1llm 793-843 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:630:873_8ssr_A_1 8ssr 630-873 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sss_A_1 8sss 692-877 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sst_A_1 8sst 692-877 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:908_7w1m_H_1 7w1m 692-908 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:764:878_5t0u_A_1 5t0u 764-878 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:772:846_1a1g_A_1 1a1g 772-846 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:795:907_6e93_A_1 6e93 795-907 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:795:907_6e94_A_1 6e94 795-907 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:796:875_2kmk_A_1 2kmk 796-875 View model · PDB
Predicted = Low TFS_tr_B7Z6D4_B7Z6D4_HUMAN:822:904_6ki6_A_1 6ki6 822-904 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 5t0u 630:908 764 878 P:A · DNA:B,C 41.4% / 56.0% 67 View · PDB TFS_tr_B7Z6D4_B7Z6D4_HUMAN:764:878_5t0u_A_1
1 1llm 630:908 793,793 843,843 P:C,D · DNA:A,B 35.3% / 52.9% 58,60 View · PDB DIMER_tr_B7Z6D4_B7Z6D4_HUMAN:793:843_1llm_C_1
1 8sst 630:908 692 877 P:A · DNA:B,C 34.5% / 52.1% 92 View · PDB TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sst_A_1
2 8sss 630:908 692 877 P:A · DNA:B,C 34.5% / 52.1% 92 View · PDB TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:877_8sss_A_1
3 7w1m 630:908 692 908 P:H · DNA:F,G 32.6% / 51.5% 66 View · PDB TFS_tr_B7Z6D4_B7Z6D4_HUMAN:692:908_7w1m_H_1
5 8ssr 630:908 630 873 P:A · DNA:B,C 29.1% / 45.0% 91 View · PDB TFS_tr_B7Z6D4_B7Z6D4_HUMAN:630:873_8ssr_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
259-281PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
287-310PF13909C2H2-type zinc-finger domainNo overlap with loaded model regions
796-818PF00096Zinc finger, C2H2 typeoverlaps 630-908
826-846PF00096Zinc finger, C2H2 typeoverlaps 630-908