ModCRE DB

Transcription factor

B7Z7H3

cDNA FLJ57654, highly similar to Zinc finger protein 307

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 390 aa

89 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)84
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 66.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.6% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 60.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.8% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 57.8% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 57.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 56.1% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.6% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.2% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 54.7% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 54.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 54.5% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.2% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 54.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.8% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 53.5% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 53.4% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 52.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.7% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 52.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 52.4% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.0% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 52.0% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 52.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.5% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.2% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 51.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.1% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 51.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 51.1% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.1% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.1% identity Open · Scan
M01440_2.00 NN 70-40% CisBP TACGCCAC 51.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 50.8% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.8% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 50.6% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 50.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.6% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.4% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.4% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 50.4% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.2% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 50.0% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.0% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 50.0% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 50.0% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 50.0% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B7Z7H3_B7Z7H3_HUMAN:131:382_5wjq_D_1 ModCRE Homology model GGGGGCCCCGGGGGGGGGGGCGGGATTT Region 131-382 · 1 3D model Open · Scan
TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3j_E_1 ModCRE Homology model TCAGGGGGCCGCGGGGGGTGCCC Region 151-386 · 1 3D model Open · Scan
TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3m_C_1 ModCRE Homology model GACGGGGCCCGGGGGGGCTGCAGC Region 151-386 · 1 3D model Open · Scan
TFS_tr_B7Z7H3_B7Z7H3_HUMAN:152:299_2i13_A_1 ModCRE Homology model TTTCAGTACGAGTATCTATAT Region 152-299 · 1 3D model Open · Scan
TFS_tr_B7Z7H3_B7Z7H3_HUMAN:190:299_5ei9_E_1 ModCRE Homology model GCCCCAGGGGGGGGTCCC Region 190-299 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 390 aa
131-386

Region 131-386 5 PWM

Residues
256 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 131-3866 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B7Z7H3_B7Z7H3_HUMAN:219:270_1llm_D_1 1llm 219-270 View model · PDB
Predicted = Low TFS_tr_B7Z7H3_B7Z7H3_HUMAN:131:382_5wjq_D_1 5wjq 131-382 View model · PDB
Predicted = Low TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3j_E_1 5v3j 151-386 View model · PDB
Predicted = Low TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3m_C_1 5v3m 151-386 View model · PDB
Predicted = Low TFS_tr_B7Z7H3_B7Z7H3_HUMAN:152:299_2i13_A_1 2i13 152-299 View model · PDB
Predicted = Low TFS_tr_B7Z7H3_B7Z7H3_HUMAN:190:299_5ei9_E_1 5ei9 190-299 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 131:386 190 299 P:E · DNA:A,B 59.1% / 70.0% 99 View · PDB TFS_tr_B7Z7H3_B7Z7H3_HUMAN:190:299_5ei9_E_1
4 2i13 131:386 152 299 P:A · DNA:C,D 54.7% / 68.2% 96 View · PDB TFS_tr_B7Z7H3_B7Z7H3_HUMAN:152:299_2i13_A_1
1 1llm 131:386 219,219 270,270 P:C,D · DNA:A,B 48.1% / 63.5% 59,61 View · PDB DIMER_tr_B7Z7H3_B7Z7H3_HUMAN:219:270_1llm_D_1
1 5v3m 131:386 151 386 P:C · DNA:A,B 44.3% / 61.2% 85 View · PDB TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3m_C_1
2 5v3j 131:386 151 386 P:E · DNA:A,B 44.3% / 61.2% 85 View · PDB TFS_tr_B7Z7H3_B7Z7H3_HUMAN:151:386_5v3j_E_1
3 5wjq 131:386 131 382 P:D · DNA:A,B 41.9% / 58.9% 89 View · PDB TFS_tr_B7Z7H3_B7Z7H3_HUMAN:131:382_5wjq_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
68-105PF01352KRAB boxNo overlap with loaded model regions
165-187PF00096Zinc finger, C2H2 typeoverlaps 131-386
193-215PF00096Zinc finger, C2H2 typeoverlaps 131-386
221-243PF00096Zinc finger, C2H2 typeoverlaps 131-386
249-271PF00096Zinc finger, C2H2 typeoverlaps 131-386
277-299PF00096Zinc finger, C2H2 typeoverlaps 131-386
332-354PF00096Zinc finger, C2H2 typeoverlaps 131-386
360-382PF00096Zinc finger, C2H2 typeoverlaps 131-386