ModCRE DB

Transcription factor

B7Z959

cDNA FLJ54736, highly similar to Scaffold attachment factor B

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 666 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE1
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B7Z959_B7Z959_HUMAN:76:107_6wmi_A_1 ModCRE Homology model GGGTTGGCCCCGA Region 76-107 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 666 aa
76-107

Region 76-107 1 PWM

Residues
32 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
6WMI
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model 1 summary row
Region 76-1071 model · 1 summary row
Actions
Predicted = Low TFS_tr_B7Z959_B7Z959_HUMAN:76:107_6wmi_A_1 6wmi 76-107 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6wmi 76:107 76 107 P:A · DNA:E,F 34.4% / 53.1% 21 View · PDB TFS_tr_B7Z959_B7Z959_HUMAN:76:107_6wmi_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
31-66PF02037SAP domainNo overlap with loaded model regions
159-227PF00076RNA recognition motifNo overlap with loaded model regions