ModCRE DB

Transcription factor

B7Z993

cDNA FLJ50380, highly similar to Zinc finger protein 418

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 642 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07712_2.00 Known CisBP ACATTTTTTTAATCTAAAAAAACATTTACA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 642 aa
198-356

Region 198-356 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 198-3561 model
Actions
Predicted = Low TFS_B7Z993:198:356_5t0u_A_1 5t0u 198-356 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
197-218PF00096Zinc finger, C2H2 typeoverlaps 198-356
224-246PF00096Zinc finger, C2H2 typeoverlaps 198-356
252-274PF00096Zinc finger, C2H2 typeoverlaps 198-356
280-302PF00096Zinc finger, C2H2 typeoverlaps 198-356
308-330PF00096Zinc finger, C2H2 typeoverlaps 198-356
336-358PF00096Zinc finger, C2H2 typeoverlaps 198-356
364-386PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
392-414PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
420-442PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
448-470PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
476-498PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
504-526PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
557-579PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
585-607PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
613-635PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions