Region 20-127 0 PWM
- Residues
- 108 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5EGB
- Sources
- Structure model
Transcription factor
B7Z9C7
Zinc finger protein 423 (Olf1/EBF-associated zinc finger protein) (Smad- and Olf-interacting zinc finger protein)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1167 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M10151_2.00 | NN 70+% | CisBP | GCACCCTTGGGTGC | 99.9% identity | Open · Scan | |
| M02669_2.00 | NN 70+% | CisBP | GCACCCCTGGGTGCC | 98.0% identity | Open · Scan | |
| MA0116.1 | NN 70+% | JASPAR | GGCACCCAGGGGTGC | 96.3% identity | Open · Scan |
Nearest Neighbor (70% - 40%)1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M01432_2.00 | NN 70-40% | CisBP | GACGCCAC | 52.0% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1167 aa
20-127
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 20-1271 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B7Z9C7:20:127_5egb_A_1 | 5egb | 20-127 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 21-43 | PF00096 | Zinc finger, C2H2 type | overlaps 20-127 |
| 77-99 | PF00096 | Zinc finger, C2H2 type | overlaps 20-127 |
| 105-127 | PF00096 | Zinc finger, C2H2 type | overlaps 20-127 |
| 363-386 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 515-537 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 575-598 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 813-837 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |
| 841-866 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |
| 1004-1026 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |