ModCRE DB

Transcription factor

B7ZBM3 - FOXP4

Forkhead box P4

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 668 aa

16 Generated PWM 15 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)9
MotifPredictionSourceDNA bindingSupportLogoActions
M08115_2.00 NN 70-40% CisBP AAGTAAACAGAA 63.8% identity Open · Scan
M00793_2.00 NN 70-40% CisBP TGTAAACAA 60.7% identity Open · Scan
MA0481.1 NN 70-40% JASPAR CAAAAGTAAACAAAG 60.4% identity Open · Scan
M09101_2.00 NN 70-40% CisBP AGTAAACAA 57.2% identity Open · Scan
MA0593.1 NN 70-40% JASPAR AAGTAAACAAA 57.1% identity Open · Scan
M01017_2.00 NN 70-40% CisBP AAAAACAA 54.0% identity Open · Scan
M05866_2.00 NN 70-40% CisBP GTAAACAAAT 52.3% identity Open · Scan
M03753_2.00 NN 70-40% CisBP AAACAACAACAA 50.9% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 50.6% identity Open · Scan
ModCRE7
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_F_1 ModCRE Homology model TTTTGAAAAAAATTTTGGG Region 454-535 · 1 3D model Open · Scan
DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_K_1 ModCRE Homology model CTATTAAATAAAAAATTCC Region 454-535 · 1 3D model Open · Scan
DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_3qrf_G_1 ModCRE Homology model AAAAATTTTTTCATAG Region 454-535 · 1 3D model Open · Scan
DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:517_6ncm_A_1 ModCRE Homology model TTGTTTTTTTTTT Region 455-517 · 1 3D model Open · Scan
DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:534_4wk8_G_1 ModCRE Homology model AAAATTATTTGTTTAAATG Region 455-534 · 1 3D model Open · Scan
TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_K_1 ModCRE Homology model CTATTAAATAAAAAATTCC Region 454-535 · 1 3D model Open · Scan
TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_3qrf_G_1 ModCRE Homology model AAAAATTTTTTCATAG Region 454-535 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 668 aa
454-535

Region 454-535 7 PWM

Residues
82 aa
Domains
PF00250 · Forkhead domain
3D models
15 active PDBs · 10 summary rows
Templates
2A07, 2AS5, 3QRF, 4WK8, 6NCM, 7VOX
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
15 active PDB models 10 summary rows
Region 454-53515 models · 10 summary rows
Actions
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_F_1 2a07 454-535 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_J_1 2a07 454-535 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_K_1 2a07 454-535 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_3qrf_G_1 3qrf 454-535 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:516_7vox_C_1 7vox 455-516 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:517_6ncm_A_1 6ncm 455-517 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:534_4wk8_G_1 4wk8 455-534 View model · PDB
Predicted = Low DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_G_1 2a07 457-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_F_1 2a07 454-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_J_1 2a07 454-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_K_1 2a07 454-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2as5_F_1 2as5 454-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_3qrf_G_1 3qrf 454-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_G_1 2a07 457-535 View model · PDB
Predicted = Low TFS_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_H_1 2a07 457-535 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2a07 441:535 454,454 535,535 P:F,K · DNA:A,B 90.2% / 95.1% 100,98 View · PDB DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_K_1
1 2a07 441:535 454,454 535,535 P:F,K · DNA:A,B 90.2% / 95.1% 100,98 View · PDB TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_F_1
2 2a07 441:535 454,454 535,535 P:J,K · DNA:A,B 90.2% / 95.1% 98,98 View · PDB DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_J_1
2 2as5 441:535 454 535 P:F · DNA:A,B 90.2% / 95.1% 98 View · PDB TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2as5_F_1
3 2a07 441:535 454,454 535,535 P:J,K · DNA:A,B 90.2% / 95.1% 98,98 View · PDB TFS_tr_B7ZBM3_B7ZBM3_HUMAN:454:535_2a07_J_1
3 2a07 441:535 457,454 535,535 P:G,K · DNA:A,B 89.9% / 94.9% 100,98 View · PDB DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_G_1
4 2a07 441:535 457 535 P:H · DNA:C,D 89.9% / 94.9% 100 View · PDB TFS_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_H_1
5 2a07 441:535 457,454 535,535 P:G,K · DNA:A,B 89.9% / 94.9% 100,98 View · PDB TFS_tr_B7ZBM3_B7ZBM3_HUMAN:457:535_2a07_G_1
4 4wk8 441:535 455,455 534,534 P:F,G · DNA:A,B 77.5% / 91.2% 100,100 View · PDB DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:534_4wk8_G_1
5 7vox 441:535 455,455 516,516 P:A,C · DNA:D,E 48.4% / 72.6% 72,72 View · PDB DIMER_tr_B7ZBM3_B7ZBM3_HUMAN:455:516_7vox_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
303-371PF16159FOXP coiled-coil domainNo overlap with loaded model regions
455-532PF00250Forkhead domainoverlaps 454-535