Region 553-837 0 PWM
- Residues
- 285 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF13909 · C2H2-type zinc-finger domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5WJQ
- Sources
- Structure model
Transcription factor
B7ZKJ5 - ZFX
ZFX protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 844 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)1
Nearest Neighbor (70% - 40%)2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04486_2.00 | NN 70-40% | CisBP | GACCCCCTGCTGTGC | 50.0% identity | Open · Scan | |
| M08541_2.00 | NN 70-40% | CisBP | CTAAGCCAC | 50.0% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
844 aa
553-837
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 553-8371 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B7ZKJ5:553:837_5wjq_D_1 | 5wjq | 553-837 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 109-449 | PF04704 | Zfx/Zfy transcription activation region | No overlap with loaded model regions |
| 464-486 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 528-549 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 587-609 | PF00096 | Zinc finger, C2H2 type | overlaps 553-837 |
| 615-640 | PF13909 | C2H2-type zinc-finger domain | overlaps 553-837 |
| 701-723 | PF00096 | Zinc finger, C2H2 type | overlaps 553-837 |
| 758-780 | PF00096 | Zinc finger, C2H2 type | overlaps 553-837 |