ModCRE DB

Transcription factor

B8ZZJ5 - MEF2B

Myocyte enhancer factor 2B

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 286 aa

17 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0660.1 NN 70+% JASPAR GCTATAAATAGC 93.0% identity Open · Scan
M10936_2.00 NN 70+% CisBP TCCGGTGCTAAAAATAGCACCT 86.0% identity Open · Scan
MA0773.1 NN 70+% JASPAR ACTATAAATAGA 83.0% identity Open · Scan
MA0052.1 NN 70+% JASPAR CTATTTATAG 82.8% identity Open · Scan
MA0497.1 NN 70+% JASPAR ATGCTAAAAATAGAA 80.7% identity Open · Scan
M08214_2.00 NN 70+% CisBP CTAAAAATAA 75.9% identity Open · Scan
M05557_2.00 NN 70+% CisBP CCAAATATGG 71.2% identity Open · Scan
Nearest Neighbor (70% - 40%)10
MotifPredictionSourceDNA bindingSupportLogoActions
M02697_2.00 NN 70-40% CisBP CCAAAAATGGAAAT 61.3% identity Open · Scan
M08587_2.00 NN 70-40% CisBP TTACCTATAATTAAATTAGCA 59.0% identity Open · Scan
M06985_2.00 NN 70-40% CisBP CCAAAAAAGGAAAGT 57.5% identity Open · Scan
M10923_2.00 NN 70-40% CisBP ATTACCAAATTGGGAAAT 55.8% identity Open · Scan
M02694_2.00 NN 70-40% CisBP ATTGCCAAATTGGGTAAG 55.0% identity Open · Scan
M08143_2.00 NN 70-40% CisBP CCAAAAATGGA 54.2% identity Open · Scan
M08144_2.00 NN 70-40% CisBP CCAAAAAAGGAAA 53.3% identity Open · Scan
M10909_2.00 NN 70-40% CisBP ATTACCATATATAGTAAT 53.3% identity Open · Scan
M06983_2.00 NN 70-40% CisBP TCACCA 52.7% identity Open · Scan
M06989_2.00 NN 70-40% CisBP TTACCAAAAATGGAAAAA 50.7% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 286 aa
2-72

Region 2-72 0 PWM

Residues
71 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
3MU6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-721 model
Actions
Predicted = Low DIMER_B8ZZJ5:2:72_3mu6_B_1 3mu6 2-72 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-57PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 2-72