ModCRE DB

Transcription factor

B9EK70

Uncharacterized protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 540 aa

83 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 97.4% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 80.0% identity Open · Scan
M07565_2.00 NN 70+% CisBP CCTCTGGGGGCTCGTCCA 75.2% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 71.0% identity Open · Scan
M07761_2.00 NN 70+% CisBP CTGATTATTCACCCA 70.9% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 70.5% identity Open · Scan
M07775_2.00 NN 70+% CisBP GCCGAAACCCGGG 70.3% identity Open · Scan
Nearest Neighbor (70% - 40%)76
MotifPredictionSourceDNA bindingSupportLogoActions
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 68.8% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 68.2% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 67.3% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 66.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 63.9% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 63.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 63.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 62.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.5% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 59.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.9% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 58.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.6% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 56.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.9% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 54.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 54.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 54.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 54.0% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 53.9% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.6% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 52.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.8% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.3% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 51.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.0% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.8% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 50.6% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.2% identity Open · Scan
M01868_2.00 NN 70-40% CisBP TCTTGGCG 50.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.0% identity Open · Scan
M04409_2.00 NN 70-40% CisBP GGCGGCCATTTTGG 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.0% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 540 aa
200-476

Region 200-476 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 200-4761 model
Actions
Predicted = Low TFS_B9EK70:200:476_5v3j_E_1 5v3j 200-476 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
177-195PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeoverlaps 200-476
229-251PF00096Zinc finger, C2H2 typeoverlaps 200-476
257-279PF00096Zinc finger, C2H2 typeoverlaps 200-476
285-307PF00096Zinc finger, C2H2 typeoverlaps 200-476
313-335PF00096Zinc finger, C2H2 typeoverlaps 200-476
341-363PF00096Zinc finger, C2H2 typeoverlaps 200-476
369-391PF00096Zinc finger, C2H2 typeoverlaps 200-476
397-419PF00096Zinc finger, C2H2 typeoverlaps 200-476
425-447PF00096Zinc finger, C2H2 typeoverlaps 200-476
453-475PF00096Zinc finger, C2H2 typeoverlaps 200-476
481-503PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
509-531PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions