ModCRE DB

Transcription factor

B9VVT8 - HNF4alpha

HNF4alpha10/11/12

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 103 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0114.1 Known JASPAR AGGCCAAAGGTCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 103 aa
33-103

Region 33-103 0 PWM

Residues
71 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
3CBB
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 33-1031 model
Actions
Predicted = Low DIMER_B9VVT8:33:103_3cbb_A_1 3cbb 33-103 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
34-102PF00105Double treble clef zinc finger, C4 typeoverlaps 33-103