ModCRE DB

Transcription factor

C0SQ93 - ERRgamma

Bisphenol A receptor ERRgamma2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 435 aa

24 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M09296_2.00 NN 70+% CisBP TCAAGGTCA 99.7% identity Open · Scan
MA0643.1 NN 70+% JASPAR TCAAGGTCAT 99.7% identity Open · Scan
MA0141.3 NN 70+% JASPAR TCAAGGTCATA 78.1% identity Open · Scan
MA0141.1 NN 70+% JASPAR AGCTCAAGGTCA 74.9% identity Open · Scan
Nearest Neighbor (70% - 40%)20
MotifPredictionSourceDNA bindingSupportLogoActions
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 67.0% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 66.5% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.0% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 58.1% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 57.1% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 55.1% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 55.1% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.7% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 54.7% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 54.3% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 54.0% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 53.3% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 53.3% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 51.3% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 51.3% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 50.6% identity Open · Scan
M00686_2.00 NN 70-40% CisBP AGTGATCA 50.0% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 50.0% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 50.0% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 435 aa
101-170

Region 101-170 0 PWM

Residues
70 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
4OLN
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 101-1701 model
Actions
Predicted = Low DIMER_C0SQ93:101:170_4oln_A_1 4oln 101-170 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
104-172PF00105Double treble clef zinc finger, C4 typeoverlaps 101-170
243-417PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions