ModCRE DB

Transcription factor

C8CJL3 - ESR1

Estrogen receptor alpha delta 3*,4,5,6,7,8*/984 isoform

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 59 aa

79 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M09309_2.00 NN 70+% CisBP AGGTCAGGGTGACCT 95.3% identity Open · Scan
MA0112.1 NN 70+% JASPAR CCAGGTCACCGTGACCCC 95.3% identity Open · Scan
MA0258.1 NN 70+% JASPAR CAAGGTCACGGTGACCTG 93.0% identity Open · Scan
MA1148.1 NN 70+% JASPAR ATGTAGGTCAAAGGTCAT 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)75
MotifPredictionSourceDNA bindingSupportLogoActions
M09296_2.00 NN 70-40% CisBP TCAAGGTCA 69.7% identity Open · Scan
MA0141.1 NN 70-40% JASPAR AGCTCAAGGTCA 69.7% identity Open · Scan
MA0141.3 NN 70-40% JASPAR TCAAGGTCATA 69.7% identity Open · Scan
MA0643.1 NN 70-40% JASPAR TCAAGGTCAT 69.7% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 69.0% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 69.0% identity Open · Scan
M02419_2.00 NN 70-40% CisBP TCGAGAAT 66.6% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 66.6% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 66.6% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 66.6% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 66.6% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 66.6% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 60.5% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 60.5% identity Open · Scan
M02418_2.00 NN 70-40% CisBP CGGAAGCAAA 60.0% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 58.5% identity Open · Scan
M01295_2.00 NN 70-40% CisBP AATTTGTAGC 57.8% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 57.8% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 57.8% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 57.8% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 57.8% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 57.8% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 57.8% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 56.4% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 56.4% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 56.4% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 56.4% identity Open · Scan
M02400_2.00 NN 70-40% CisBP GGGGTCAC 56.0% identity Open · Scan
M03435_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 56.0% identity Open · Scan
MA0855.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 56.0% identity Open · Scan
MA0856.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 56.0% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 54.5% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 54.0% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 54.0% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 54.0% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 53.6% identity Open · Scan
M03421_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 53.6% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 53.6% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 53.6% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 53.6% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 53.6% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 53.6% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 52.7% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 52.6% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 52.6% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 52.5% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 52.5% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 52.3% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 52.3% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 52.3% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 52.3% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 52.3% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 52.3% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 52.3% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 52.3% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 51.2% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 51.2% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 51.2% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 51.2% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 51.2% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 51.2% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 51.2% identity Open · Scan
MA0484.1 NN 70-40% JASPAR AGAGTCCAAAGTCCA 51.2% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 51.2% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 51.2% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 51.2% identity Open · Scan
M00814_2.00 NN 70-40% CisBP AAAGTCAAAT 51.1% identity Open · Scan
MA0676.1 NN 70-40% JASPAR AAAAGTCAA 51.1% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 50.0% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 50.0% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 50.0% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 50.0% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 50.0% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 50.0% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 59 aa
1-42

Region 1-42 0 PWM

Residues
42 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1LAT
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-421 model
Actions
Predicted = Low DIMER_C8CJL3:1:42_1lat_A_1 1lat 1-42 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-43PF00105Double treble clef zinc finger, C4 typeoverlaps 1-42