Region 147-257 0 PWM
- Residues
- 111 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 6E93
- Sources
- Structure model
Transcription factor
C9J2N8 - ZNF823
Zinc finger protein 823
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 469 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M07733_2.00 | Known | CisBP | TCTTTCTCTCTCTCC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
469 aa
147-257
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 147-2571 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_C9J2N8:147:257_6e93_A_1 | 6e93 | 147-257 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 120-143 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |
| 148-170 | PF00096 | Zinc finger, C2H2 type | overlaps 147-257 |
| 176-198 | PF00096 | Zinc finger, C2H2 type | overlaps 147-257 |
| 204-226 | PF00096 | Zinc finger, C2H2 type | overlaps 147-257 |
| 260-282 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 316-338 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 345-366 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 372-394 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 427-449 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |