Region 68-149 3 PWM
- Residues
- 82 aa
- Domains
- PF02319 · E2F/DP family winged-helix DNA-binding domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 1CF7, 4YO2
- Sources
- Predicted = Low
Transcription factor
C9J461 - TFDP2
Transcription factor Dp-2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 220 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)1
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_C9J461_C9J461_HUMAN:105:147_4yo2_A_1 | ModCRE | Homology model | TTTCGCGGGGGAAAA | Region 105-147 · 1 3D model | Open · Scan | |
| TFS_tr_C9J461_C9J461_HUMAN:120:145_1cf7_A_1 | ModCRE | Homology model | GCTTACCGGAAAAAA | Region 120-145 · 1 3D model | Open · Scan | |
| TFS_tr_C9J461_C9J461_HUMAN:68:149_1cf7_B_1 | ModCRE | Homology model | TTTTCGCGCGGGCCC | Region 68-149 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
220 aa
68-149
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 68-1493 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_C9J461_C9J461_HUMAN:105:147_4yo2_A_1 | 4yo2 | 105-147 | View model · PDB |
| Predicted = Low | TFS_tr_C9J461_C9J461_HUMAN:120:145_1cf7_A_1 | 1cf7 | 120-145 | View model · PDB |
| Predicted = Low | TFS_tr_C9J461_C9J461_HUMAN:68:149_1cf7_B_1 | 1cf7 | 68-149 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 1cf7 | 68:149 | 68 | 149 | P:B · DNA:C,D | 100.0% / 100.0% | 100 | View · PDB TFS_tr_C9J461_C9J461_HUMAN:68:149_1cf7_B_1 |
| 3 | 1cf7 | 68:149 | 120 | 145 | P:A · DNA:C,D | 44.4% / 66.7% | 38 | View · PDB TFS_tr_C9J461_C9J461_HUMAN:120:145_1cf7_A_1 |
| 2 | 4yo2 | 68:149 | 105 | 147 | P:A · DNA:C,D | 35.6% / 62.2% | 23 | View · PDB TFS_tr_C9J461_C9J461_HUMAN:105:147_4yo2_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 68-147 | PF02319 | E2F/DP family winged-helix DNA-binding domain | overlaps 68-149 |
| 154-220 | PF08781 | Transcription factor DP | No overlap with loaded model regions |