ModCRE DB

Transcription factor

C9J4R0 - NR1H3

Nuclear receptor subfamily 1 group H member 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 193 aa

56 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0494.1 NN 70+% JASPAR TGACCTAAAGTAACCTCTG 83.8% identity Open · Scan
Nearest Neighbor (70% - 40%)55
MotifPredictionSourceDNA bindingSupportLogoActions
MA0115.1 NN 70-40% JASPAR AAAGGTCAAAGGTCAAC 69.1% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.8% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 57.5% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 56.5% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 56.5% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 54.9% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 54.9% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.5% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 53.7% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 53.7% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 53.7% identity Open · Scan
MA0258.1 NN 70-40% JASPAR CAAGGTCACGGTGACCTG 53.7% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 53.5% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 53.5% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 53.5% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 53.5% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 53.5% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 53.5% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 53.5% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 53.5% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 53.5% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 53.5% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 53.2% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 53.0% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 53.0% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 52.8% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 52.8% identity Open · Scan
M00371_2.00 NN 70-40% CisBP ACTTAATATATAC 52.7% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 52.7% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 52.7% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 52.1% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 52.1% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 52.1% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 52.1% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 52.1% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 52.0% identity Open · Scan
MA0114.3 NN 70-40% JASPAR GGGGTCAAAGTCCAAT 52.0% identity Open · Scan
MA0484.1 NN 70-40% JASPAR AGAGTCCAAAGTCCA 51.9% identity Open · Scan
M00811_2.00 NN 70-40% CisBP AAAGGTCAAG 51.7% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 51.6% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 51.5% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 51.3% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 51.3% identity Open · Scan
MA0114.1 NN 70-40% JASPAR AGGCCAAAGGTCA 51.1% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 50.7% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 50.7% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 50.6% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 50.6% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 50.6% identity Open · Scan
MA1534.1 NN 70-40% JASPAR ATGAACTTT 50.6% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 50.5% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 50.0% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 50.0% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 50.0% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 193 aa
92-173

Region 92-173 0 PWM

Residues
82 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
4CN2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 92-1731 model
Actions
Predicted = Low DIMER_C9J4R0:92:173_4cn2_C_1 4cn2 92-173 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
97-164PF00105Double treble clef zinc finger, C4 typeoverlaps 92-173