ModCRE DB

Transcription factor

C9JE62 - BBX

BBX high mobility group box domain containing

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 97 aa

6 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M03975_2.00 NN 70-40% CisBP TAACAATATCATTGTTA 65.7% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_C9JE62_C9JE62_HUMAN:68:95_2gzk_A_1 ModCRE Homology model GGCTTTTTAATTCACC Region 68-95 · 1 3D model Open · Scan
TFS_tr_C9JE62_C9JE62_HUMAN:79:95_4y60_C_1 ModCRE Homology model GGCGCATTTCCCTTT Region 79-95 · 1 3D model Open · Scan
TFS_tr_C9JE62_C9JE62_HUMAN:79:95_6l6y_D_1 ModCRE Homology model GTCCGAATTGTATGC Region 79-95 · 1 3D model Open · Scan
TFS_tr_C9JE62_C9JE62_HUMAN:81:97_6jrp_A_1 ModCRE Homology model ACCTCTTCACC Region 81-97 · 1 3D model Open · Scan
TFS_tr_C9JE62_C9JE62_HUMAN:81:97_7m5w_A_1 ModCRE Homology model CCCTGTTTGCCTGGC Region 81-97 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 97 aa
68-97

Region 68-97 5 PWM

Residues
30 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs · 5 summary rows
Templates
2GZK, 4Y60, 6JRP, 6L6Y, 7M5W
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 68-975 models · 5 summary rows
Actions
Predicted = Low TFS_tr_C9JE62_C9JE62_HUMAN:68:95_2gzk_A_1 2gzk 68-95 View model · PDB
Predicted = Low TFS_tr_C9JE62_C9JE62_HUMAN:79:95_4y60_C_1 4y60 79-95 View model · PDB
Predicted = Low TFS_tr_C9JE62_C9JE62_HUMAN:79:95_6l6y_D_1 6l6y 79-95 View model · PDB
Predicted = Low TFS_tr_C9JE62_C9JE62_HUMAN:81:97_6jrp_A_1 6jrp 81-97 View model · PDB
Predicted = Low TFS_tr_C9JE62_C9JE62_HUMAN:81:97_7m5w_A_1 7m5w 81-97 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6jrp 68:97 81 97 P:A · DNA:B,C 76.5% / 94.1% 22 View · PDB TFS_tr_C9JE62_C9JE62_HUMAN:81:97_6jrp_A_1
2 7m5w 68:97 81 97 P:A · DNA:B,C 76.5% / 94.1% 12 View · PDB TFS_tr_C9JE62_C9JE62_HUMAN:81:97_7m5w_A_1
3 4y60 68:97 79 95 P:C · DNA:A,B 58.8% / 76.5% 22 View · PDB TFS_tr_C9JE62_C9JE62_HUMAN:79:95_4y60_C_1
4 6l6y 68:97 79 95 P:D · DNA:A,B 58.8% / 76.5% 21 View · PDB TFS_tr_C9JE62_C9JE62_HUMAN:79:95_6l6y_D_1
5 2gzk 68:97 68 95 P:A · DNA:B,C 39.3% / 53.6% 17 View · PDB TFS_tr_C9JE62_C9JE62_HUMAN:68:95_2gzk_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags2
HMG_boxMyc_N