Region 28-98 0 PWM
- Residues
- 71 aa
- Domains
- PF00010 · Helix-loop-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 1HLO
- Sources
- Structure model
Transcription factor
C9JK03 - CLOCK
Circadian locomoter output cycles protein kaput (EC 2.3.1.48)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 182 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
182 aa
28-98
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 28-981 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_C9JK03:28:98_1hlo_A_1 | 1hlo | 28-98 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 35-83 | PF00010 | Helix-loop-helix DNA-binding domain | overlaps 28-98 |
| 110-176 | PF00989 | PAS fold | No overlap with loaded model regions |