Transcription factor

C9JNM8 - MTERF1

Mitochondrial transcription termination factor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 139 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_3mva_O_1	ModCRE	Homology model	AGAAATCCCC	Region 53-139 · 1 3D model		Open · Scan
TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_5co0_O_1	ModCRE	Homology model	AGTAATCTAA	Region 53-139 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 139 aa

53-139

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

2 active PDB models 2 summary rows

Region 53-1392 models · 2 summary rows

				Actions
Predicted = Low	TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_3mva_O_1	3mva	53-139	View model · PDB
Predicted = Low	TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_5co0_O_1	5co0	53-139	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	5co0	53:139	53	139	P:O · DNA:D,E	100.0% / 100.0%	26	View · PDB TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_5co0_O_1
2	3mva	53:139	53	139	P:O · DNA:D,E	100.0% / 100.0%	26	View · PDB TFS_tr_C9JNM8_C9JNM8_HUMAN:53:139_3mva_O_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
56-137	PF02536	mTERF	overlaps 53-139