ModCRE DB

Transcription factor

C9JQA6 - ZNF433

Zinc finger protein 433

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 684 aa

54 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70+% CisBP CCACCTCA 72.9% identity Open · Scan
Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 64.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.5% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 63.5% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 62.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 60.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 58.9% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 57.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 56.3% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 56.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 55.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 54.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.4% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 54.2% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 54.2% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 53.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.1% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 52.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 52.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 51.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.7% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 51.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 51.5% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.6% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 50.6% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.0% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 50.0% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 684 aa
209-368

Region 209-368 0 PWM

Residues
160 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 209-3681 model
Actions
Predicted = Low TFS_C9JQA6:209:368_5t0u_A_1 5t0u 209-368 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
17-58PF01352KRAB boxNo overlap with loaded model regions
181-203PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
237-259PF00096Zinc finger, C2H2 typeoverlaps 209-368
265-287PF00096Zinc finger, C2H2 typeoverlaps 209-368
293-315PF00096Zinc finger, C2H2 typeoverlaps 209-368
321-343PF00096Zinc finger, C2H2 typeoverlaps 209-368
349-371PF00096Zinc finger, C2H2 typeoverlaps 209-368
391-416PF13465Zinc-finger double domainNo overlap with loaded model regions
433-455PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
461-483PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
545-567PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
573-595PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
629-651PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
657-679PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions