ModCRE DB

Transcription factor

C9JVC3 - ZNF717

Zinc finger protein 717

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 864 aa

102 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)98
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 59.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.8% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 58.2% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 57.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.7% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 56.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 55.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 55.2% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 55.1% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 55.1% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 55.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 55.1% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 55.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.9% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.5% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.4% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 54.1% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 54.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.9% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.8% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 53.8% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 53.8% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 53.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 53.6% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 53.6% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.5% identity Open · Scan
MA0733.1 NN 70-40% JASPAR TTACGCCCACGCATTT 53.5% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.4% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.3% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 53.0% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 53.0% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 52.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 52.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.7% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.6% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 52.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 52.2% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 52.2% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 51.9% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 51.2% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 51.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 51.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 50.8% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.7% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 50.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.6% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.6% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 50.6% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_C9JVC3_C9JVC3_HUMAN:298:451_2i13_A_1 ModCRE Homology model ACATAAGGCCACCTATAGCCT Region 298-451 · 1 3D model Open · Scan
TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3j_E_1 ModCRE Homology model GGGCTAAGGAGGGGGGGAAGAGGGGC Region 316-592 · 1 3D model Open · Scan
TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3m_C_1 ModCRE Homology model GGGGGGTGGCGGGGGGGGGCGGGGCG Region 316-592 · 1 3D model Open · Scan
TFS_tr_C9JVC3_C9JVC3_HUMAN:342:620_5wjq_D_1 ModCRE Homology model GGGGGGGGGTTCGGGGGGGGGCTGTCGG Region 342-620 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 864 aa
298-620
790-839

Region 298-620 4 PWM

Residues
323 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models

Region 790-839 0 PWM

Residues
50 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 298-6205 models · 5 summary rows
Actions
Predicted = Low TFS_tr_C9JVC3_C9JVC3_HUMAN:298:451_2i13_A_1 2i13 298-451 View model · PDB
Predicted = Low TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3j_E_1 5v3j 316-592 View model · PDB
Predicted = Low TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3m_C_1 5v3m 316-592 View model · PDB
Predicted = Low TFS_tr_C9JVC3_C9JVC3_HUMAN:317:615_7w1m_H_1 7w1m 317-615 View model · PDB
Predicted = Low TFS_tr_C9JVC3_C9JVC3_HUMAN:342:620_5wjq_D_1 5wjq 342-620 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 259:621 298 451 P:A · DNA:C,D 62.3% / 72.7% 100 View · PDB TFS_tr_C9JVC3_C9JVC3_HUMAN:298:451_2i13_A_1
1 5wjq 259:621 342 620 P:D · DNA:A,B 53.4% / 65.2% 99 View · PDB TFS_tr_C9JVC3_C9JVC3_HUMAN:342:620_5wjq_D_1
2 5v3m 259:621 316 592 P:C · DNA:A,B 52.3% / 65.0% 100 View · PDB TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3m_C_1
3 5v3j 259:621 316 592 P:E · DNA:A,B 52.3% / 65.0% 100 View · PDB TFS_tr_C9JVC3_C9JVC3_HUMAN:316:592_5v3j_E_1
5 7w1m 259:621 317 615 P:H · DNA:F,G 35.4% / 53.2% 92 View · PDB TFS_tr_C9JVC3_C9JVC3_HUMAN:317:615_7w1m_H_1
Region 790-8391 model · 1 summary row
Actions
Predicted = Low DIMER_tr_C9JVC3_C9JVC3_HUMAN:790:839_1llm_D_1 1llm 790-839 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 259:621 790,790 839,839 P:C,D · DNA:A,B 46.0% / 62.0% 57,58 View · PDB DIMER_tr_C9JVC3_C9JVC3_HUMAN:790:839_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
261-283PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
291-311PF00096Zinc finger, C2H2 typeoverlaps 298-620
345-367PF00096Zinc finger, C2H2 typeoverlaps 298-620
373-395PF00096Zinc finger, C2H2 typeoverlaps 298-620
401-423PF00096Zinc finger, C2H2 typeoverlaps 298-620
429-451PF00096Zinc finger, C2H2 typeoverlaps 298-620
457-479PF00096Zinc finger, C2H2 typeoverlaps 298-620
485-507PF00096Zinc finger, C2H2 typeoverlaps 298-620
513-535PF00096Zinc finger, C2H2 typeoverlaps 298-620
541-563PF00096Zinc finger, C2H2 typeoverlaps 298-620
569-591PF00096Zinc finger, C2H2 typeoverlaps 298-620
597-619PF00096Zinc finger, C2H2 typeoverlaps 298-620
708-730PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
736-758PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
764-786PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
792-814PF00096Zinc finger, C2H2 typeoverlaps 790-839
820-842PF00096Zinc finger, C2H2 typeoverlaps 790-839