Region 24-53 0 PWM
- Residues
- 30 aa
- Domains
- PF02319 · E2F/DP family winged-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 4YO2
- Sources
- Structure model
Transcription factor
C9JYE9 - E2F5
E2F transcription factor 5
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 249 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)1
Nearest Neighbor (70% - 40%)2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M01968_2.00 | NN 70-40% | CisBP | GCGCGCCAAA | 51.1% identity | Open · Scan | |
| M06871_2.00 | NN 70-40% | CisBP | ATTTGGCGCCAAAA | 50.0% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
249 aa
24-53
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 24-531 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_C9JYE9:24:53_4yo2_A_1 | 4yo2 | 24-53 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 2-53 | PF02319 | E2F/DP family winged-helix DNA-binding domain | overlaps 24-53 |
| 70-167 | PF16421 | E2F transcription factor CC-MB domain | No overlap with loaded model regions |