ModCRE DB

Transcription factor

D0QYR0 - MYB/NFIB

Transcriptional activator Myb

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 677 aa

23 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0100.3 NN 70+% JASPAR ACCAACTGTC 99.6% identity Open · Scan
M09260_2.00 NN 70+% CisBP CCAACTGCCACC 97.4% identity Open · Scan
MA0100.1 NN 70+% JASPAR GGCCGTTG 90.0% identity Open · Scan
M11069_2.00 NN 70+% CisBP TCTAACGGC 83.2% identity Open · Scan
M09261_2.00 NN 70+% CisBP CCAACTGCCACC 73.5% identity Open · Scan
M03919_2.00 NN 70+% CisBP TGTAACGGTCATTT 72.8% identity Open · Scan
Nearest Neighbor (70% - 40%)17
MotifPredictionSourceDNA bindingSupportLogoActions
M01279_2.00 NN 70-40% CisBP TAACGGTCAT 68.0% identity Open · Scan
M07087_2.00 NN 70-40% CisBP AAAATAACCGTTACAAA 66.6% identity Open · Scan
M02301_2.00 NN 70-40% CisBP CTGTAACGGAA 62.7% identity Open · Scan
M07090_2.00 NN 70-40% CisBP CAACTCCCAACTACC 62.5% identity Open · Scan
M02288_2.00 NN 70-40% CisBP TCTACCTACCT 62.0% identity Open · Scan
M07109_2.00 NN 70-40% CisBP TTTGTTCACCTAACT 62.0% identity Open · Scan
M07361_2.00 NN 70-40% CisBP AAATTGTAACGGTTA 61.7% identity Open · Scan
M01277_2.00 NN 70-40% CisBP TAACGGTCA 60.7% identity Open · Scan
M07001_2.00 NN 70-40% CisBP CTTTTCCAACCACCTTTTC 58.6% identity Open · Scan
M07155_2.00 NN 70-40% CisBP AATAACCGTAA 57.8% identity Open · Scan
M02327_2.00 NN 70-40% CisBP ATACCGGTCA 56.3% identity Open · Scan
M07095_2.00 NN 70-40% CisBP TAACCGTCATAACCG 55.8% identity Open · Scan
M07126_2.00 NN 70-40% CisBP TTTACCTACCTTT 55.1% identity Open · Scan
M07060_2.00 NN 70-40% CisBP ACCTAAC 50.9% identity Open · Scan
MA0670.1 NN 70-40% JASPAR GGTGCCAAGT 50.6% identity Open · Scan
M02332_2.00 NN 70-40% CisBP AGAGTCAGTT 50.4% identity Open · Scan
M11070_2.00 NN 70-40% CisBP GTAACCGTTTTTT 50.4% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 677 aa
16-120

Region 16-120 0 PWM

Residues
105 aa
Domains
PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
3D models
1 active PDB
Templates
1H8A
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 16-1201 model
Actions
Predicted = Low TFS_D0QYR0:16:120_1h8a_C_1 1h8a 16-120 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
21-67PF00249Myb-like DNA-binding domainoverlaps 16-120
73-116PF00249Myb-like DNA-binding domainoverlaps 16-120
197-242PF07988LMSTEN motifNo overlap with loaded model regions
327-485PF09316C-myb, C-terminalNo overlap with loaded model regions
521-605PF00859CTF/NF-I family transcription modulation regionNo overlap with loaded model regions