ModCRE DB

Transcription factor

D2CFI4

CRX like homeobox 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 326 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00274_2.00 NN 70+% CisBP GCTAATCCGA 75.4% identity Open · Scan
Nearest Neighbor (70% - 40%)5
MotifPredictionSourceDNA bindingSupportLogoActions
M09208_2.00 NN 70-40% CisBP CCTAATCCTCTTA 60.0% identity Open · Scan
MA0467.1 NN 70-40% JASPAR AAGAGGATTAG 60.0% identity Open · Scan
M00679_2.00 NN 70-40% CisBP TTAATCCC 50.8% identity Open · Scan
M03076_2.00 NN 70-40% CisBP TTAATTAAATTAA 50.8% identity Open · Scan
MA0874.1 NN 70-40% JASPAR GTCCATTAATTAATGGA 50.8% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 326 aa
44-103

Region 44-103 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 44-1031 model
Actions
Predicted = Low DIMER_D2CFI4:44:103_1fjl_A_1 1fjl 44-103 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
46-99PF00046Homeodomainoverlaps 44-103