ModCRE DB

Transcription factor

D3Y299 - ZFP82

Zinc finger protein 545

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 532 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M05853_2.00 Known CisBP CCACCTTTAGCCATATCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 532 aa
167-444

Region 167-444 0 PWM

Residues
278 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 167-4441 model
Actions
Predicted = Low TFS_D3Y299:167:444_5wjq_D_1 5wjq 167-444 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
170-192PF00096Zinc finger, C2H2 typeoverlaps 167-444
198-220PF00096Zinc finger, C2H2 typeoverlaps 167-444
254-276PF00096Zinc finger, C2H2 typeoverlaps 167-444
282-302PF00096Zinc finger, C2H2 typeoverlaps 167-444
338-360PF00096Zinc finger, C2H2 typeoverlaps 167-444
366-388PF00096Zinc finger, C2H2 typeoverlaps 167-444
394-416PF00096Zinc finger, C2H2 typeoverlaps 167-444
422-444PF00096Zinc finger, C2H2 typeoverlaps 167-444
450-472PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
478-500PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
506-528PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions