ModCRE DB

Transcription factor

D5K9R9 - POU5F1

POU domain protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 360 aa

30 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1115.1 NN 70+% JASPAR ATATGCAAATT 99.7% identity Open · Scan
M05501_2.00 NN 70+% CisBP AATTATGCTAATTAAG 99.4% identity Open · Scan
MA0792.1 NN 70+% JASPAR TATGCAAAT 95.5% identity Open · Scan
M08032_2.00 NN 70+% CisBP CCATTGTTATGCAAA 90.1% identity Open · Scan
MA0142.1 NN 70+% JASPAR CTTTGTTATGCAAAT 83.8% identity Open · Scan
Nearest Neighbor (70% - 40%)25
MotifPredictionSourceDNA bindingSupportLogoActions
M05500_2.00 NN 70-40% CisBP TTATGCAAATGAG 68.0% identity Open · Scan
MA0789.1 NN 70-40% JASPAR TATGCAAAT 67.3% identity Open · Scan
M00553_2.00 NN 70-40% CisBP ATGCATAA 67.1% identity Open · Scan
M02236_2.00 NN 70-40% CisBP CTAATTAAC 67.1% identity Open · Scan
MA0787.1 NN 70-40% JASPAR TTATGCAAATTA 67.1% identity Open · Scan
MA0788.1 NN 70-40% JASPAR ATTATGCTAATTT 67.1% identity Open · Scan
M02240_2.00 NN 70-40% CisBP ATAATGAA 66.2% identity Open · Scan
M09227_2.00 NN 70-40% CisBP CTCATGAATATTCAAG 65.9% identity Open · Scan
MA0786.1 NN 70-40% JASPAR TTATGCAAATTA 65.9% identity Open · Scan
M07542_2.00 NN 70-40% CisBP TGCATA 65.7% identity Open · Scan
M02245_2.00 NN 70-40% CisBP ATGCTAATTA 61.2% identity Open · Scan
M02235_2.00 NN 70-40% CisBP CTAATTAA 60.9% identity Open · Scan
M02243_2.00 NN 70-40% CisBP ATAATGCATA 58.6% identity Open · Scan
M02242_2.00 NN 70-40% CisBP GTATAATTAG 58.0% identity Open · Scan
MA0627.2 NN 70-40% JASPAR AATATGCAAATAA 57.7% identity Open · Scan
M10829_2.00 NN 70-40% CisBP ATATAATTATGCAAATTAAAAGA 56.6% identity Open · Scan
MA0785.1 NN 70-40% JASPAR AATATGCAAATT 56.6% identity Open · Scan
M00549_2.00 NN 70-40% CisBP GATAATGAG 56.3% identity Open · Scan
MA0627.1 NN 70-40% JASPAR TTGTATGCAAATTAGA 56.3% identity Open · Scan
M00548_2.00 NN 70-40% CisBP GATAATTAA 55.2% identity Open · Scan
M00802_2.00 NN 70-40% CisBP ATTATTAATA 53.1% identity Open · Scan
MA0784.1 NN 70-40% JASPAR AATATGCAAATTAG 52.4% identity Open · Scan
M05454_2.00 NN 70-40% CisBP ATGCATAAATTAA 52.3% identity Open · Scan
M06556_2.00 NN 70-40% CisBP TATGCAAATTAG 52.1% identity Open · Scan
MA0791.1 NN 70-40% JASPAR ATGCATAATTAATGAG 50.3% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 360 aa
138-287

Region 138-287 0 PWM

Residues
150 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
3L1P
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 138-2871 model
Actions
Predicted = Low DIMER_D5K9R9:138:287_3l1p_A_1 3l1p 138-287 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
143-212PF00157Pou domain - N-terminal to homeobox domainoverlaps 138-287
231-287PF00046Homeodomainoverlaps 138-287