Region 87-165 0 PWM
- Residues
- 79 aa
- Domains
- PF01429 · Methyl-CpG binding domain
- 3D models
- 1 active PDB
- Templates
- 6OGJ
- Sources
- Structure model
Transcription factor
D5L9I4 - MECP2
Methyl-CpG-binding protein 2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 173 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M09257_2.00 | NN 70+% | CisBP | CCCGGAG | 99.4% identity | Open · Scan | |
| M00806_2.00 | NN 70+% | CisBP | AATGACACTA | 94.8% identity | Open · Scan |
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
173 aa
87-165
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 87-1651 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_D5L9I4:87:165_6ogj_B_1 | 6ogj | 87-165 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 96-160 | PF01429 | Methyl-CpG binding domain | overlaps 87-165 |