ModCRE DB

Transcription factor

D6RBC4 - ZBTB38

Zinc finger and BTB domain-containing protein 38

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 771 aa

10 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0591.1 NN 70-40% JASPAR AGGATGACTCAGCAC 56.8% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 53.4% identity Open · Scan
M00135_2.00 NN 70-40% CisBP AGCCCCCCAA 52.0% identity Open · Scan
MA1633.1 NN 70-40% JASPAR GATGACTCAGCAA 50.8% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_D6RBC4_D6RBC4_HUMAN:460:506_1llm_C_1 ModCRE Homology model CCCCCCGGGGGG Region 460-506 · 1 3D model Open · Scan
TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_2lt7_A_1 ModCRE Homology model GACTTCCCCGAAACCCG Region 448-542 · 1 3D model Open · Scan
TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmv_A_1 ModCRE Homology model CCTATCCCGCGAACCC Region 448-542 · 1 3D model Open · Scan
TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmx_A_1 ModCRE Homology model CGATCCCAGAAAAGG Region 448-542 · 1 3D model Open · Scan
TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfa_A_1 ModCRE Homology model GTATCCCAGAAACCG Region 448-542 · 1 3D model Open · Scan
TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfc_A_1 ModCRE Homology model GTATCCCGGCAACGA Region 448-542 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 771 aa
448-542

Region 448-542 6 PWM

Residues
95 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2LT7, 5VMV, 5VMX, 6DFA, 6DFC
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 448-5426 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_D6RBC4_D6RBC4_HUMAN:460:506_1llm_C_1 1llm 460-506 View model · PDB
Predicted = Low TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_2lt7_A_1 2lt7 448-542 View model · PDB
Predicted = Low TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmv_A_1 5vmv 448-542 View model · PDB
Predicted = Low TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmx_A_1 5vmx 448-542 View model · PDB
Predicted = Low TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfa_A_1 6dfa 448-542 View model · PDB
Predicted = Low TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfc_A_1 6dfc 448-542 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 5vmv 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 81 View · PDB TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmv_A_1
3 2lt7 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 71 View · PDB TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_2lt7_A_1
4 5vmx 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 77 View · PDB TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_5vmx_A_1
5 6dfc 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 81 View · PDB TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfc_A_1
1 6dfa 447:542 448 542 P:A · DNA:D,E 58.9% / 74.7% 79 View · PDB TFS_tr_D6RBC4_D6RBC4_HUMAN:448:542_6dfa_A_1
1 1llm 447:542 460,460 506,506 P:C,D · DNA:A,B 27.7% / 48.9% 54,55 View · PDB DIMER_tr_D6RBC4_D6RBC4_HUMAN:460:506_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
23-125PF00651BTB/POZ domainNo overlap with loaded model regions
460-482PF00096Zinc finger, C2H2 typeoverlaps 448-542