Transcription factor

D6RC45 - NFKB1

Nuclear factor NF-kappa-B p105 subunit

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 144 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA0105.1	NN 70+%	JASPAR	GGGAATTTCC	99.3% identity		Open · Scan
M03448_2.00	NN 70+%	CisBP	AGGGGATTCCCCT	98.5% identity		Open · Scan

Nearest Neighbor (70% - 40%)1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA0778.1	NN 70-40%	JASPAR	AGGGGATTCCCCT	67.5% identity		Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 144 aa

42-144

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 42-1441 model

				Actions
Predicted = Low	DIMER_D6RC45:42:144_1a3q_B_1	1a3q	42-144	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
45-144	PF00554	Rel homology DNA-binding domain	overlaps 42-144