ModCRE DB

Transcription factor

D6RF85 - ZNF652

Zinc finger protein 652

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 426 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1657.1 NN 70+% JASPAR GAAAGAGTTAAA 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M02938_2.00 NN 70-40% CisBP ATTAACCCTTTCT 63.2% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 54.5% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 52.3% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 50.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 50.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 50.0% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 426 aa
120-308

Region 120-308 0 PWM

Residues
189 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 120-3081 model
Actions
Predicted = Low TFS_D6RF85:120:308_5v3j_E_1 5v3j 120-308 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
149-171PF00096Zinc finger, C2H2 typeoverlaps 120-308
177-199PF00096Zinc finger, C2H2 typeoverlaps 120-308
205-227PF00096Zinc finger, C2H2 typeoverlaps 120-308
233-255PF00096Zinc finger, C2H2 typeoverlaps 120-308
261-283PF00096Zinc finger, C2H2 typeoverlaps 120-308
289-308PF00096Zinc finger, C2H2 typeoverlaps 120-308