Transcription factor

D6RH30 - NFKB1

Nuclear factor NF-kappa-B p105 subunit (DNA-binding factor KBF1) (EBP-1) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 977 aa

2 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA0105.1	NN 70+%	JASPAR	GGGAATTTCC	99.8% identity		Open · Scan
M03448_2.00	NN 70+%	CisBP	AGGGGATTCCCCT	98.6% identity		Open · Scan

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 977 aa

50-360

Residues: 311 aa
Domains: PF00554 · Rel homology DNA-binding domain PF16179 · Rel homology dimerisation domain
3D models: 1 active PDB
Templates: 1A3Q
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 50-3601 model

				Actions
Predicted = Low	DIMER_D6RH30:50:360_1a3q_B_1	1a3q	50-360	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
53-251	PF00554	Rel homology DNA-binding domain	overlaps 50-360
260-361	PF16179	Rel homology dimerisation domain	overlaps 50-360
595-689	PF12796	Ankyrin repeats (3 copies)	No overlap with loaded model regions
692-756	PF12796	Ankyrin repeats (3 copies)	No overlap with loaded model regions
827-900	PF00531	Death domain	No overlap with loaded model regions