Region 3-32 3 PWM
- Residues
- 30 aa
- Domains
- PF00651 · BTB/POZ domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 7XUR, 8IUE, 8IUH
- Sources
- Predicted = Low
Transcription factor
D6RJ09 - ZNF131
Zinc finger protein 131
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 66 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M09690_2.00 | NN 70-40% | CisBP | ATTATAATATATAT | 62.5% identity | Open · Scan | |
| MA1101.1 | NN 70-40% | JASPAR | GATGACTCAGCAAT | 60.6% identity | Open · Scan | |
| M06102_2.00 | NN 70-40% | CisBP | GCTCAATAA | 50.0% identity | Open · Scan | |
| M06439_2.00 | NN 70-40% | CisBP | CGCAAAAAA | 50.0% identity | Open · Scan |
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_7xur_A_1 | ModCRE | Homology model | GCGGGC | Region 3-32 · 1 3D model | Open · Scan | |
| TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iue_4_1 | ModCRE | Homology model | CCGT | Region 3-32 · 1 3D model | Open · Scan | |
| TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iuh_4_1 | ModCRE | Homology model | ACA | Region 3-32 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
66 aa
3-32
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 3-323 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_7xur_A_1 | 7xur | 3-32 | View model · PDB |
| Predicted = Low | TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iue_4_1 | 8iue | 3-32 | View model · PDB |
| Predicted = Low | TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iuh_4_1 | 8iuh | 3-32 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7xur | 3:32 | 3 | 32 | P:A · DNA:X,Y | 36.7% / 56.7% | 9 | View · PDB TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_7xur_A_1 |
| 2 | 8iuh | 3:32 | 3 | 32 | P:4 · DNA:X,Y | 36.7% / 56.7% | 7 | View · PDB TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iuh_4_1 |
| 3 | 8iue | 3:32 | 3 | 32 | P:4 · DNA:X,Y | 36.7% / 56.7% | 7 | View · PDB TFS_tr_D6RJ09_D6RJ09_HUMAN:3:32_8iue_4_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 24-64 | PF00651 | BTB/POZ domain | overlaps 3-32 |