ModCRE DB

Transcription factor

E0YMI9 - HNF1A

HNF1 alpha A splice variant 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 452 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00408_2.00 NN 70+% CisBP TTAACCAG 76.8% identity Open · Scan
MA0046.1 NN 70+% JASPAR GGTTAATAATTAAC 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M09144_2.00 NN 70-40% CisBP GGTTAATGATTAACT 68.2% identity Open · Scan
M00171_2.00 NN 70-40% CisBP TTAACTAG 68.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 452 aa
85-177

Region 85-177 0 PWM

Residues
93 aa
Domains
PF04814 · Hepatocyte nuclear factor 1 (HNF-1), N terminus
3D models
1 active PDB
Templates
2H8R
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 85-1771 model
Actions
Predicted = Low DIMER_E0YMI9:85:177_2h8r_B_1 2h8r 85-177 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-168PF04814Hepatocyte nuclear factor 1 (HNF-1), N terminusoverlaps 85-177
213-361PF04812Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminusNo overlap with loaded model regions
363-451PF04813Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminusNo overlap with loaded model regions