Region 341-381 0 PWM
- Residues
- 41 aa
- Domains
- PF16423 · Transcription factor COE1 helix-loop-helix domain
- 3D models
- 1 active PDB
- Templates
- 2YPB
- Sources
- Structure model
Transcription factor
E5RFQ1 - EBF1
Transcription factor COE1 (Early B-cell factor)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 523 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M09044_2.00 | Known | CisBP | GGTCCCTGGGGACTT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
523 aa
341-381
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 341-3811 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_E5RFQ1:341:381_2ypb_A_1 | 2ypb | 341-381 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 19-247 | PF16422 | Transcription factor COE1 DNA-binding domain | No overlap with loaded model regions |
| 254-334 | PF01833 | IPT/TIG domain | No overlap with loaded model regions |
| 339-382 | PF16423 | Transcription factor COE1 helix-loop-helix domain | overlaps 341-381 |