ModCRE DB

Transcription factor

E5RGS9 - CHRAC1

Chromatin accessibility complex subunit 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 56 aa

7 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1644.1 NN 70-40% JASPAR AGCCAATCAGA 52.9% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_4g92_C_1 ModCRE Homology model AATTCCCCCGGCCACG Region 13-47 · 1 3D model Open · Scan
TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y35_C_1 ModCRE Homology model AAGTTTCGCCGGACG Region 13-47 · 1 3D model Open · Scan
TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y36_C_1 ModCRE Homology model GAAGGTTCGCGGGGGA Region 13-47 · 1 3D model Open · Scan
TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw7_C_1 ModCRE Homology model AAGTCCCCCGCCCCA Region 13-47 · 1 3D model Open · Scan
TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw9_C_1 ModCRE Homology model AAGTCCCCCGGCAAC Region 13-47 · 1 3D model Open · Scan
TFS_tr_E5RGS9_E5RGS9_HUMAN:19:48_4awl_C_1 ModCRE Homology model AAGCCCCGCGGGACG Region 19-48 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 56 aa
13-48

Region 13-48 6 PWM

Residues
36 aa
Domains
PF00808 · Histone-like transcription factor (CBF/NF-Y) and archaeal histone
3D models
6 active PDBs · 5 summary rows
Templates
4AWL, 4G92, 6Y35, 6Y36, 7AW7, 7AW9
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 5 summary rows
Region 13-486 models · 5 summary rows
Actions
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_4g92_C_1 4g92 13-47 View model · PDB
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y35_C_1 6y35 13-47 View model · PDB
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y36_C_1 6y36 13-47 View model · PDB
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw7_C_1 7aw7 13-47 View model · PDB
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw9_C_1 7aw9 13-47 View model · PDB
Predicted = Low TFS_tr_E5RGS9_E5RGS9_HUMAN:19:48_4awl_C_1 4awl 19-48 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6y36 13:48 13 47 P:C · DNA:D,E 45.7% / 71.4% 32 View · PDB TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y36_C_1
2 6y35 13:48 13 47 P:C · DNA:D,E 45.7% / 71.4% 32 View · PDB TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_6y35_C_1
3 7aw7 13:48 13 47 P:C · DNA:F,G 45.7% / 71.4% 29 View · PDB TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw7_C_1
4 4g92 13:48 13 47 P:C · DNA:D,E 45.7% / 71.4% 29 View · PDB TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_4g92_C_1
5 7aw9 13:48 13 47 P:C · DNA:F,G 45.7% / 71.4% 29 View · PDB TFS_tr_E5RGS9_E5RGS9_HUMAN:13:47_7aw9_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-49PF00808Histone-like transcription factor (CBF/NF-Y) and archaeal histoneoverlaps 13-48