Region 75-198 5 PWM
- Residues
- 124 aa
- Domains
- PF02186 · TFIIE beta subunit core domain PF18121 · TFA2 Winged helix domain 2
- 3D models
- 5 active PDBs
- Templates
- 5IY6, 5IY7, 5IY9, 5IYA, 5IYD
- Sources
- Predicted = Low
Transcription factor
E5RH41 - GTF2E2
General transcription factor IIE subunit 2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 198 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy6_R_1 | ModCRE | Homology model | CCCCCAGGGTG | Region 75-198 · 1 3D model | Open · Scan | |
| TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy7_R_1 | ModCRE | Homology model | GGCCTTTCC | Region 75-198 · 1 3D model | Open · Scan | |
| TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy9_R_1 | ModCRE | Homology model | CGCCCCGGCG | Region 75-198 · 1 3D model | Open · Scan | |
| TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iya_R_1 | ModCRE | Homology model | CCCCCCGGGCG | Region 75-198 · 1 3D model | Open · Scan | |
| TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iyd_R_1 | ModCRE | Homology model | CCCCCCGCG | Region 75-198 · 1 3D model | Open · Scan |
No DNA-interacting structure identified
None of the 5 assessable structural models contains a protein–DNA non-hydrogen atom contact within 4.5 Å.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
198 aa
75-198
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 75-1985 models
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy6_R_1 | 5iy6 | 75-198 | View model · PDB |
| Predicted = Low | TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy7_R_1 | 5iy7 | 75-198 | View model · PDB |
| Predicted = Low | TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iy9_R_1 | 5iy9 | 75-198 | View model · PDB |
| Predicted = Low | TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iya_R_1 | 5iya | 75-198 | View model · PDB |
| Predicted = Low | TFS_tr_E5RH41_E5RH41_HUMAN:75:198_5iyd_R_1 | 5iyd | 75-198 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 74-145 | PF02186 | TFIIE beta subunit core domain | overlaps 75-198 |
| 146-192 | PF18121 | TFA2 Winged helix domain 2 | overlaps 75-198 |