ModCRE DB

Transcription factor

E7ES87 - PAX5

Paired box 5

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 220 aa

19 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M09622_2.00 NN 70+% CisBP GCAGCCAAGCGTGACC 86.6% identity Open · Scan
MA0014.2 NN 70+% JASPAR GAGGGCAGCCAAGCGTGAC 77.7% identity Open · Scan
MA0014.1 NN 70+% JASPAR AGAGCACTGAAGCGTAACCG 77.0% identity Open · Scan
M10806_2.00 NN 70+% CisBP AATTTTCACGCATGAGTTCAC 75.0% identity Open · Scan
MA0069.1 NN 70+% JASPAR TTCACGCATGAGTT 75.0% identity Open · Scan
MA0781.1 NN 70+% JASPAR CGTCACGCATGACTGCA 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)13
MotifPredictionSourceDNA bindingSupportLogoActions
M03947_2.00 NN 70-40% CisBP AGCGTGACGGTTCCGCT 68.7% identity Open · Scan
M03945_2.00 NN 70-40% CisBP GTCATGCGTGACG 68.5% identity Open · Scan
M03887_2.00 NN 70-40% CisBP GATAATCGATTATC 62.1% identity Open · Scan
M03903_2.00 NN 70-40% CisBP ATAATTGATTAT 62.1% identity Open · Scan
M02426_2.00 NN 70-40% CisBP ACCGTGACCAC 61.7% identity Open · Scan
M00349_2.00 NN 70-40% CisBP CTAATTAGC 59.3% identity Open · Scan
MA0068.2 NN 70-40% JASPAR CTAATTAG 59.3% identity Open · Scan
MA0068.1 NN 70-40% JASPAR GAAAAATTTCCAATACTCCACTCCCCCCCC 56.2% identity Open · Scan
MA0779.1 NN 70-40% JASPAR CGTCACGCATGACTGCA 55.5% identity Open · Scan
M02690_2.00 NN 70-40% CisBP AGTCACGC 54.9% identity Open · Scan
M02425_2.00 NN 70-40% CisBP CAGTCAAGCG 54.7% identity Open · Scan
MA0067.1 NN 70-40% JASPAR AGTCACGC 51.5% identity Open · Scan
MA1481.1 NN 70-40% JASPAR CTAATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 220 aa
121-155

Region 121-155 0 PWM

Residues
35 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 121-1551 model
Actions
Predicted = Low DIMER_E7ES87:121:155_1fjl_B_1 1fjl 121-155 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-32PF00292'Paired box' domainNo overlap with loaded model regions