Region 21-77 3 PWM
- Residues
- 57 aa
- Domains
- PF21524 · SAM domain-containing protein 1, WH domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 7Y43, 8H7A
- Sources
- Predicted = Low
Transcription factor
E7EV75 - ZMYND11
Zinc finger MYND domain-containing protein 11
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 617 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_E7EV75_E7EV75_HUMAN:21:77_7y43_A_1 | ModCRE | Homology model | TCGCGGCGCGGT | Region 21-77 · 1 3D model | Open · Scan | |
| TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_A_1 | ModCRE | Homology model | TTAAAAAAAAA | Region 21-77 · 1 3D model | Open · Scan | |
| TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_B_1 | ModCRE | Homology model | TTGCGCGCTG | Region 21-77 · 1 3D model | Open · Scan | |
| TFS_tr_E7EV75_E7EV75_HUMAN:297:313_5xsk_B_1 | ModCRE | Homology model | CGGGGCCT | Region 297-313 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
617 aa
21-77
297-313
Region 297-313 1 PWM
- Residues
- 17 aa
- Domains
- PF00855 · PWWP domain
- 3D models
- 1 active PDB · 1 summary row
- Templates
- 5XSK
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 21-773 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_E7EV75_E7EV75_HUMAN:21:77_7y43_A_1 | 7y43 | 21-77 | View model · PDB |
| Predicted = Low | TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_A_1 | 8h7a | 21-77 | View model · PDB |
| Predicted = Low | TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_B_1 | 8h7a | 21-77 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 8h7a | 21:77 | 21 | 77 | P:B · DNA:C,D | 36.8% / 54.4% | 74 | View · PDB TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_B_1 |
| 2 | 8h7a | 21:77 | 21 | 77 | P:A · DNA:C,D | 36.8% / 54.4% | 74 | View · PDB TFS_tr_E7EV75_E7EV75_HUMAN:21:77_8h7a_A_1 |
| 3 | 7y43 | 21:77 | 21 | 77 | P:A · DNA:B,C | 36.8% / 54.4% | 72 | View · PDB TFS_tr_E7EV75_E7EV75_HUMAN:21:77_7y43_A_1 |
Region 297-3131 model · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_E7EV75_E7EV75_HUMAN:297:313_5xsk_B_1 | 5xsk | 297-313 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 19-67 | PF21524 | SAM domain-containing protein 1, WH domain | overlaps 21-77 |
| 197-256 | PF00439 | Bromodomain | No overlap with loaded model regions |
| 297-365 | PF00855 | PWWP domain | overlaps 297-313 |
| 481-533 | PF23461 | ZMYND11 protein coiled-coil | No overlap with loaded model regions |
| 578-613 | PF24324 | ZMYND11/ZMYD8, MYND zinc finger | No overlap with loaded model regions |