ModCRE DB

Transcription factor

E7EX64 - ZNF76

Zinc finger protein 76

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 340 aa

13 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0088.1 NN 70-40% JASPAR GATTTCCCATAATGCCTTGC 65.6% identity Open · Scan
MA0088.2 NN 70-40% JASPAR TACCCACAATGCATTG 65.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.0% identity Open · Scan
MA0752.1 NN 70-40% JASPAR TCCATCCCATAATACTC 52.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.7% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 50.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3j_E_1 ModCRE Homology model TGGGCCGGGGGGGTGCAGGCCCCAAA Region 161-340 · 1 3D model Open · Scan
TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3m_C_1 ModCRE Homology model CGGCAGTGGGGGGGCAGGCCCCAAG Region 161-340 · 1 3D model Open · Scan
TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5wjq_D_1 ModCRE Homology model AGGAACAGGGGGGGTCCGGCCGCCGA Region 161-340 · 1 3D model Open · Scan
TFS_tr_E7EX64_E7EX64_HUMAN:176:339_2i13_A_1 ModCRE Homology model ACTTAGCTGCTACTTCTTCTG Region 176-339 · 1 3D model Open · Scan
TFS_tr_E7EX64_E7EX64_HUMAN:223:340_6wmi_A_1 ModCRE Homology model GAGGGACCCCCCCGACC Region 223-340 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 340 aa
161-340

Region 161-340 5 PWM

Residues
180 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 6WMI
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 161-3406 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_E7EX64_E7EX64_HUMAN:223:275_1llm_D_1 1llm 223-275 View model · PDB
Predicted = Low TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3j_E_1 5v3j 161-340 View model · PDB
Predicted = Low TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3m_C_1 5v3m 161-340 View model · PDB
Predicted = Low TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5wjq_D_1 5wjq 161-340 View model · PDB
Predicted = Low TFS_tr_E7EX64_E7EX64_HUMAN:176:339_2i13_A_1 2i13 176-339 View model · PDB
Predicted = Low TFS_tr_E7EX64_E7EX64_HUMAN:223:340_6wmi_A_1 6wmi 223-340 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 6wmi 161:340 223 340 P:A · DNA:E,F 52.5% / 65.3% 80 View · PDB TFS_tr_E7EX64_E7EX64_HUMAN:223:340_6wmi_A_1
1 2i13 161:340 176 339 P:A · DNA:C,D 48.8% / 61.6% 100 View · PDB TFS_tr_E7EX64_E7EX64_HUMAN:176:339_2i13_A_1
1 1llm 161:340 223,223 275,275 P:C,D · DNA:A,B 47.2% / 60.4% 56,57 View · PDB DIMER_tr_E7EX64_E7EX64_HUMAN:223:275_1llm_D_1
3 5v3m 161:340 161 340 P:C · DNA:A,B 41.1% / 58.3% 60 View · PDB TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3m_C_1
4 5v3j 161:340 161 340 P:E · DNA:A,B 41.1% / 58.3% 60 View · PDB TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5v3j_E_1
5 5wjq 161:340 161 340 P:D · DNA:A,B 40.6% / 57.8% 59 View · PDB TFS_tr_E7EX64_E7EX64_HUMAN:161:340_5wjq_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
195-219PF00096Zinc finger, C2H2 typeoverlaps 161-340
225-249PF00096Zinc finger, C2H2 typeoverlaps 161-340
285-309PF00096Zinc finger, C2H2 typeoverlaps 161-340
315-339PF00096Zinc finger, C2H2 typeoverlaps 161-340