ModCRE DB

Transcription factor

E9PID2 - NR1H3

Nuclear receptor subfamily 1 group H member 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 296 aa

35 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0494.1 NN 70+% JASPAR TGACCTAAAGTAACCTCTG 80.6% identity Open · Scan
Nearest Neighbor (70% - 40%)34
MotifPredictionSourceDNA bindingSupportLogoActions
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.8% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 56.5% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 56.5% identity Open · Scan
MA0115.1 NN 70-40% JASPAR AAAGGTCAAAGGTCAAC 56.0% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 55.0% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.5% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 53.5% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 53.5% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 53.5% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 53.2% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 53.0% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 53.0% identity Open · Scan
M00371_2.00 NN 70-40% CisBP ACTTAATATATAC 52.7% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 52.7% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 52.5% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 52.1% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 52.1% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 52.1% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 52.1% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 52.1% identity Open · Scan
MA0114.1 NN 70-40% JASPAR AGGCCAAAGGTCA 52.0% identity Open · Scan
MA0114.3 NN 70-40% JASPAR GGGGTCAAAGTCCAAT 52.0% identity Open · Scan
MA0484.1 NN 70-40% JASPAR AGAGTCCAAAGTCCA 51.9% identity Open · Scan
MA0164.1 NN 70-40% JASPAR CAAGCTT 51.8% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 51.6% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 51.5% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 51.3% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 50.7% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 50.6% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 50.0% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 50.0% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 50.0% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 50.0% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 296 aa
5-80

Region 5-80 0 PWM

Residues
76 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0O
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 5-801 model
Actions
Predicted = Low DIMER_E9PID2:5:80_1r0o_B_1 1r0o 5-80 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
6-73PF00105Double treble clef zinc finger, C4 typeoverlaps 5-80
147-279PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions