Region 149-207 1 PWM
- Residues
- 59 aa
- Domains
- PF15333 · TATA box-binding protein-associated factor 1D
- 3D models
- 1 active PDB · 1 summary row
- Templates
- 8OF0
- Sources
- Predicted = Low
Transcription factor
E9PM59 - TAF1D
TATA box-binding protein-associated factor RNA polymerase I subunit D (TATA box-binding protein-associated factor 1D) (Transcription initiation factor SL1/TIF-IB subunit D)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 215 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_E9PM59_E9PM59_HUMAN:149:207_8of0_B_1 | ModCRE | Homology model | CAGA | Region 149-207 · 1 3D model | Open · Scan |
No DNA-interacting structure identified
None of the 1 assessable structural model contains a protein–DNA non-hydrogen atom contact within 4.5 Å.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
215 aa
149-207
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
1 summary row
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 149-2071 model · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_E9PM59_E9PM59_HUMAN:149:207_8of0_B_1 | 8of0 | 149-207 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 27-212 | PF15333 | TATA box-binding protein-associated factor 1D | overlaps 149-207 |