ModCRE DB

Transcription factor

E9PME6 - USF1

Upstream stimulatory factor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 217 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0093.1 NN 70+% JASPAR CACGTGG 78.0% identity Open · Scan
Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M03615_2.00 NN 70-40% CisBP GTCACGTGAC 54.2% identity Open · Scan
M01762_2.00 NN 70-40% CisBP ATCACGTGAT 54.0% identity Open · Scan
M09479_2.00 NN 70-40% CisBP ACCACGTGAC 53.2% identity Open · Scan
M08050_2.00 NN 70-40% CisBP GGGCCACGTGACCCCG 51.1% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 217 aa
134-203

Region 134-203 0 PWM

Residues
70 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1AM9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 134-2031 model
Actions
Predicted = Low DIMER_E9PME6:134:203_1am9_B_1 1am9 134-203 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
139-194PF00010Helix-loop-helix DNA-binding domainoverlaps 134-203