Region 84-149 3 PWM
- Residues
- 66 aa
- Domains
- PF00505 · HMG (high mobility group) box
- 3D models
- 6 active PDBs · 5 summary rows
- Templates
- 4NNU, 4Y60, 6HC3, 7LBW, 7LBX
- Sources
- Predicted = Low
Transcription factor
E9PMM2 - UBTF
Upstream binding transcription factor
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 149 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_6hc3_A_1 | ModCRE | Homology model | TAACTTAAAATC | Region 84-149 · 1 3D model | Open · Scan | |
| TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_7lbw_A_1 | ModCRE | Homology model | GACTTTTAATAGTGAT | Region 84-149 · 1 3D model | Open · Scan | |
| TFS_tr_E9PMM2_E9PMM2_HUMAN:85:147_4y60_C_1 | ModCRE | Homology model | GGGCTATTGTGCCCA | Region 85-147 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
149 aa
84-149
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 84-1496 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_4nnu_A_1 | 4nnu | 84-149 | View model · PDB |
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_4nnu_B_1 | 4nnu | 84-149 | View model · PDB |
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_6hc3_A_1 | 6hc3 | 84-149 | View model · PDB |
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_7lbw_A_1 | 7lbw | 84-149 | View model · PDB |
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_7lbx_B_1 | 7lbx | 84-149 | View model · PDB |
| Predicted = Low | TFS_tr_E9PMM2_E9PMM2_HUMAN:85:147_4y60_C_1 | 4y60 | 85-147 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7lbx | 78:149 | 84 | 149 | P:B · DNA:C,D,E,F | 27.3% / 59.1% | 34 | View · PDB TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_7lbx_B_1 |
| 2 | 4nnu | 78:149 | 84 | 149 | P:B · DNA:C,D,E,F | 27.3% / 59.1% | 34 | View · PDB TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_4nnu_B_1 |
| 3 | 6hc3 | 78:149 | 84 | 149 | P:A · DNA:B,C | 27.3% / 59.1% | 34 | View · PDB TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_6hc3_A_1 |
| 4 | 7lbw | 78:149 | 84 | 149 | P:A · DNA:C,D,E,F | 27.3% / 59.1% | 34 | View · PDB TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_7lbw_A_1 |
| 5 | 4nnu | 78:149 | 84 | 149 | P:A · DNA:C,D,E,F | 27.3% / 59.1% | 34 | View · PDB TFS_tr_E9PMM2_E9PMM2_HUMAN:84:149_4nnu_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 84-147 | PF00505 | HMG (high mobility group) box | overlaps 84-149 |