Region 77-170 0 PWM
- Residues
- 94 aa
- Domains
- PF00105 · Double treble clef zinc finger, C4 type
- 3D models
- 1 active PDB
- Templates
- 1KB6
- Sources
- Structure model
Transcription factor
F1D8P9 - NR1i2
Nuclear receptor subfamily 1 group I member 2 (Orphan nuclear receptor PXR) (Pregnane X receptor)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 473 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M09283_2.00 | Known | CisBP | TGAGGTCAAAAAAGTTCAG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
473 aa
77-170
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 77-1701 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_F1D8P9:77:170_1kb6_B_1 | 1kb6 | 77-170 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 79-148 | PF00105 | Double treble clef zinc finger, C4 type | overlaps 77-170 |
| 282-450 | PF00104 | Ligand-binding domain of nuclear hormone receptor | No overlap with loaded model regions |