ModCRE DB

Transcription factor

F1D8R5 - NR3B3

Estrogen-related nuclear receptor gamma variant 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 458 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0643.1 Known JASPAR TCAAGGTCAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 458 aa
122-202

Region 122-202 0 PWM

Residues
81 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1BY4
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 122-2021 model
Actions
Predicted = Low DIMER_F1D8R5:122:202_1by4_B_1 1by4 122-202 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
127-195PF00105Double treble clef zinc finger, C4 typeoverlaps 122-202
266-440PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions