ModCRE DB

Transcription factor

F2VTX5 - KLF4

Kruppel-like factor 4 short isoform

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 145 aa

70 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)12
MotifPredictionSourceDNA bindingSupportLogoActions
M04463_2.00 NN 70+% CisBP CACCACGCCCA 99.3% identity Open · Scan
MA0039.1 NN 70+% JASPAR TAAAGGAAGG 98.2% identity Open · Scan
MA0039.3 NN 70+% JASPAR CCACACCCTGC 93.3% identity Open · Scan
MA1515.1 NN 70+% JASPAR CACCACGCCCA 88.3% identity Open · Scan
M00224_2.00 NN 70+% CisBP CCCGCCCC 83.5% identity Open · Scan
MA0599.1 NN 70+% JASPAR GCCCCGCCCC 80.7% identity Open · Scan
M09008_2.00 NN 70+% CisBP CCCGGCCCCACCCT 79.5% identity Open · Scan
MA0493.1 NN 70+% JASPAR GGCCACACCCA 78.5% identity Open · Scan
M04430_2.00 NN 70+% CisBP GACCACGCCCA 77.1% identity Open · Scan
MA0742.1 NN 70+% JASPAR GACCACGCCCTTATT 77.1% identity Open · Scan
M06169_2.00 NN 70+% CisBP GCCACGCCCAAC 75.9% identity Open · Scan
MA1517.1 NN 70+% JASPAR GGCCACGCCCA 73.5% identity Open · Scan
Nearest Neighbor (70% - 40%)58
MotifPredictionSourceDNA bindingSupportLogoActions
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 68.7% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 68.7% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 68.1% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 68.0% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 64.3% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 64.3% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 63.8% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 63.2% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 63.2% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 62.6% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 62.0% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 61.4% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 61.4% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 60.7% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 59.0% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 58.0% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 58.0% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 58.0% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 58.0% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 58.0% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 57.3% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 57.3% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 57.3% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 56.8% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 56.6% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 56.6% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 56.6% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 56.6% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 56.6% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 56.5% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 56.1% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 55.6% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 55.6% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 54.7% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 54.3% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 54.3% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 54.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 53.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 53.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 53.0% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 52.3% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.3% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 51.3% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 51.1% identity Open · Scan
MA0863.1 NN 70-40% JASPAR TTTGCACACGGCAC 51.1% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 51.0% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 50.8% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.0% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 50.0% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 50.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 50.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 145 aa
7-26

Region 7-26 0 PWM

Residues
20 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
6NCM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 7-261 model
Actions
Predicted = Low DIMER_F2VTX5:7:26_6ncm_A_1 6ncm 7-26 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
62-86PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
92-116PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
122-144PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions